Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02546 ATGGGCATTCCTTCTTTCACAGCGATGCTTGCATACATGCTTTATTCTTCTCTTGCCATAGAACTTGATTCTCTTCATGTTTCCCAGTCCCTCAGTGATGGCATGACCTTAGTGTCACAAGGTGGAAAATTTGAACTTGGTTTCTTCAGCCCTGGTAATTCTTCACACAAGCGTTACTTGGGAATTTGGTACAAGAAAATTCCAATTCAGACAGTTGTTTGGGTTGCCAATAGGGCCAACCCCATCAATGATTTCTCAGGAATTTTAACAATGAATAGCACAGGCAATCTTTTACTCACCAAAAATGGCACTGAGACTACTTTTTGGAGCACAATCTCTCGAAAACAAGCAAAGAATCCAGTATTGGAGCTCTTGGAAAGTGGCAATCTTGTGTTAAGAAATGAAGAGGAATCAAATCCAAAGGCCTATTTGTGGCAGAGCTTTGATTATCCTTCAGATACGTTCTTGCCAACCATGAAGTTGGGAAGGGACCTCCAAAATGGTTTAGATCGGCGCATAACTTCTTGGAAGAGTCCAAATGATCCATCCCCTGGAGACATTTTTATTGGTTTAGTTCTAAATGATTATCCAGTCTATTACATGATGAATGGGACAAAAAAATTATTTAGAGCTGGACCTTGGAATGGCCTATACTTCAGTGGAGAACCAAATCTGTCCCATACATATATTTTTGAAGTCAGTTTTGTATCAAACAAGGATGAGATATACTTTAGTTTTAACACCAAGGTTGATTCTATCACTGGAAGAGGTGTAATAAGCCAAACAAGTCAATCTCTTGCACACTATTTATGGGATGACAATATTAAGAATTGGAAATTTTCTGGATCATGGCCAGGTGATGTGTGTGATAAATATGACCTTTGTGGAGCCTATGGTTATTGCAGTGTAGCAGAATCAAAGCATGTCTGCCAATGCTTTAAAGGGTTCAGTCCAAAGTCACCAGAAGAATGGAACTCAAACAACTCCTCACAAGGATGCATTCGTGACAAACCATTAAGCTGCAATGTCACAACTAGTGATGTGTTTGTCAAATATACTGGCTTGAAAGTGCCAGATACTCAGCATACTAAGGTGGATGAGAATATTACTTTAGATGAATGTAGAAATCTTTGTTTGAAGAACTGCTCTTGCATGGCTTATTCCAATTCAGACATAAGAGGAGGAGGCAGTGGCTGCGCCATGTGGTTCGGCAATCTAATTGACATCAAAATGATTCAATCTGGTGGACAAGATCTATATATCCGAATGCCTGCTTTTGAGTCAGGACTTCAACAAAGGCACAAGAAAAAAGTGATAATTGCTAGCACCATTGCTGCATCTTGTGCAACACTTCTACTTTGTGTTTATGTTATATACAGAGTCCGAAGGAACAATATTGAAAAATCAAAGATAGAAGAATATATGGAAGGGCATGTAAATGATACGGATCTACCATTGTTTGATCTACTAACAATTACTACTGCGACCGAAAAGTTCTCGTTGAATAACAAAATTGGGCAAGGTGGTTTTGGACCTGTTTATAAGGGAAAATTAGCAGATGGTCTTGAAATTGCTGTGAAGAGACTCTCACATAGCTCTAGACAAGGAATGACTGAATTCATAACTGAAGTAAAGCTAATTGCGAAACTTCAGCACCGTAATCTAGTAAAACTTCTTGGTTGCTGCATTCAAGGAGAAGAAATTTTGTTAGTTTATGAATATGTGGTTAATGGTAGCCTGGACAACTTCATCTTTGATAAAACAAAAAGCAAGTTGTTGGATTGGTCTCAACGCTTGGGCATAATATttggaattactaggggactcttgtatcttcatcaagattcaagattgagaattattcatagagatcttaaggcaagtaatgttttactcgatgacaaattaaccccaaaaatatcagattttggaatggcCAGGACTTTTGGAGGAGATCAAACCGAAGGAAACACAAATAGAGTCGTCGGGACTTATGGATACATGGCTCCAGAATATGCTATTGACGGTTTGTATTCTATAAAATCCGATGTCTTCAGCTTTGGCATACTTATGATGGAAATTATATGTGGGACTAAAAACAGAGCTCTTTGTCATGCAAATGAAACTCTTAACCTCATTGGCTATGCTTGGAGGCTATGGAAAGAGGACAAAGCTTTAGAGTTGATAGATTCAACTATAAAGGAGTCATGTGTAATCTCAGAAGTAATGCGATGCATCCATGTGAGTCTGTTGTGTGTACAACAATATCCTGAAGATAGGCCTACAATGGCTTCTGTGCTTCTCATGTTAGCAAGTGAGATGGATCTAGTTGAGCCTAAAGAGCCTGGCTTCTTTCCCAAGTGGGTGTCTATGGAAGCGAATTCGCAGGCAGATCAATGTGAACTATCTTATGATGAATTAACCGTTACTTCATTAGATGGCCGGTGA 2448 0.3709 MGIPSFTAMLAYMLYSSLAIELDSLHVSQSLSDGMTLVSQGGKFELGFFSPGNSSHKRYLGIWYKKIPIQTVVWVANRANPINDFSGILTMNSTGNLLLTKNGTETTFWSTISRKQAKNPVLELLESGNLVLRNEEESNPKAYLWQSFDYPSDTFLPTMKLGRDLQNGLDRRITSWKSPNDPSPGDIFIGLVLNDYPVYYMMNGTKKLFRAGPWNGLYFSGEPNLSHTYIFEVSFVSNKDEIYFSFNTKVDSITGRGVISQTSQSLAHYLWDDNIKNWKFSGSWPGDVCDKYDLCGAYGYCSVAESKHVCQCFKGFSPKSPEEWNSNNSSQGCIRDKPLSCNVTTSDVFVKYTGLKVPDTQHTKVDENITLDECRNLCLKNCSCMAYSNSDIRGGGSGCAMWFGNLIDIKMIQSGGQDLYIRMPAFESGLQQRHKKKVIIASTIAASCATLLLCVYVIYRVRRNNIEKSKIEEYMEGHVNDTDLPLFDLLTITTATEKFSLNNKIGQGGFGPVYKGKLADGLEIAVKRLSHSSRQGMTEFITEVKLIAKLQHRNLVKLLGCCIQGEEILLVYEYVVNGSLDNFIFDKTKSKLLDWSQRLGIIFGITRGLLYLHQDSRLRIIHRDLKASNVLLDDKLTPKISDFGMARTFGGDQTEGNTNRVVGTYGYMAPEYAIDGLYSIKSDVFSFGILMMEIICGTKNRALCHANETLNLIGYAWRLWKEDKALELIDSTIKESCVISEVMRCIHVSLLCVQQYPEDRPTMASVLLMLASEMDLVEPKEPGFFPKWVSMEANSQADQCELSYDELTVTSLDGR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02546 815 SMART blect_4 28 151 IPR001480 -
Adu08g02546 815 Pfam S-locus glycoprotein domain 209 320 IPR000858 GO:0048544
Adu08g02546 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Adu08g02546 815 PANTHER - 22 811 - -
Adu08g02546 815 PIRSF SRK 2 815 IPR024171 GO:0004674
Adu08g02546 815 Gene3D Hepatocyte Growth Factor 340 421 - -
Adu08g02546 815 SMART serkin_6 499 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02546 815 ProSiteProfiles Bulb-type lectin domain profile. 22 145 IPR001480 -
Adu08g02546 815 Pfam D-mannose binding lectin 71 177 IPR001480 -
Adu08g02546 815 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Adu08g02546 815 SMART ntp_6 344 423 IPR003609 -
Adu08g02546 815 Gene3D Phosphorylase Kinase; domain 1 460 574 - -
Adu08g02546 815 Gene3D Transferase(Phosphotransferase) domain 1 575 780 - -
Adu08g02546 815 Pfam Protein tyrosine and serine/threonine kinase 500 766 IPR001245 GO:0004672|GO:0006468
Adu08g02546 815 ProSiteProfiles Protein kinase domain profile. 499 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02546 815 Gene3D - 18 148 IPR036426 -
Adu08g02546 815 Pfam PAN-like domain 341 409 IPR003609 -
Adu08g02546 815 SUPERFAMILY Protein kinase-like (PK-like) 479 770 IPR011009 -
Adu08g02546 815 CDD PAN_AP_plant 338 424 - -
Adu08g02546 815 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 811 - -
Adu08g02546 815 CDD STKc_IRAK 505 770 - -
Adu08g02546 815 CDD B_lectin 28 151 IPR001480 -
Adu08g02546 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 182 IPR036426 -
Adu08g02546 815 ProSiteProfiles EGF-like domain profile. 285 322 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02546 Adu-Chr8 41498257 41507156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02546 438 801 Receptor kinase-like Gene Family AT4G23190 51.892 1.00e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g02546 PK_Tyr_Ser-Thr 3.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02546 - - aip:110265385 1501.88