Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02545 ATGGGTGTTCTTCATTCCATTGTTATGGCTGCTTATATACTTGTTTCCTCTGTCACAGCTTCTATGGCAGTTAATGATTCCATTGGTCTTTCCCAGTACATGAGTGATGGTGAGACCTTAGTGTCCAAAAATGGATTATTTGAGCTTGGATTCTTCAGACCCGGCAACTCGACCAATTGTTACTTGGGGATCTGGTACAAGAAAATGGCCATGCATGCTGTTGTTTGGGTTGCTAACAGGGTTGACCCCATCAATGGTTTCTCAGGAAAATTAACAATGGACGACATCGGCAATCTCATCCTTAAAAACAATGACTCAGTTGTTTGGAGCACGGCCTCTCAAAGAGAACCACAGAATCCAGTGGCACAGCTCATGGACAGCGGCAATCTTGTGATATGGAATGGTGGAGGTGCAGAGTCAGATGACATTTTGTGGCAAAGCTTTGACTATCCAACTGATACATATTTGCCAGGCATGAAGATAGGAAGGGATCTTCGAAATGGTTCGGATTGGCGATTAACATCTTGGAAGAGTGTAGATGATCCTTCTCCAGGTAACTTCTCTTGGGGGTTAGCCCTCAGTGATTATCCTGAGTTTGCCATCATGAATGGAACCAAAAAGTTCTCTCGGTTCGGACCTTGGAATGGCATGTATTTTAGTGGATTGCCAAATGTAAGTGTTGACTCTGTTATTGAATTCAATTATGTCGACAACCAGAACGAGATATACTACACCTCTAGCTCCAAGAATGATTCTATCATCTCCAGAGTTGTAATAAACCAAACAAGTAAAGCGTATAGTCGGTATGTCTGGGTGGAAAAGACTCAAACTTGGAGTGTTTTTGAGTCACTGCCTAGTGATGTCTGTGATAATTATGGCCATTGCGGAGCCTATGGGGGTTGCATGGCCACAGGAGCTCCAGTTTGCTTGTGTTTAAGAGGTTTCAGGCCCAAGTCACCAGAAGCTTGGAACTCATCAAACTGGGCTCAAGGATGTGTCCGCAATGAACCATTAAATTGCACTGATGGATTTGTCAGATACGAAGGCTTGAAACTACCAGATACTCAACGTACTAGGCTGATTGATACTCTTGATATAAGTGACTGCAGGGCTTTGTGCTTGAATAATTGCTCTTGTACGGCTTATACTAATCCAGACATAGGGACGGGTGGTGTTGGTTGTGTCATGTGGTTCGGCGATCTATTTGACATCAAACTGTTTCAATCTGATGGACAAGATCTATACATCCGAATGCCTGCTTCCCAGTTAGTTTCCAACAATGAACTTCAACACAGGAGCAAGAATAATAAAGTGATAATTGCTAGCACCGTTGCTGCAATTTGTGGGACGTTCTTACTTTGTGTTTACGTTATATATAGATTTCGAAGGAACAGTAATGAAAAATCAAAGATGCAAGAGTATATGGAAGGCTATGTAAATGATACGGATCTACCACTATTTGATCTACTGACTATTAATATTGCCACTGACAAGTTTTCGTTCAATAATAAGATCGGACAAGGTGGTTTTGGACCTGTGTATAAGGGAAAATTAGCACATGGACAAGAAATTGCTGTTAAGAGACTCTCACATAGCTCTAGGCAAGGAATGGCTGAATTCATAACTGAAGTAAAACTAATTGCAAAACTTCAGCACCGTAATCTAGTAAAACTTCTTGGTTGTTGCATTCAAGGAGAAGAAAAATTGCTAGTTTATGAGTATGTGGTTAATGGTAGCCTAGACACCTTCATTTTTGATCAAGAAAAAAGTAAGTTGttggattggcctcgacgcttccacataatatttggaattgccaggggactcttgtatcttcatcaagattctagacttaggattatccatcgggatcttaaagcaagtaacattttactagatgataaattaaatccaaaaatatcagattttggaatggcCAGAACTTTTGGAGGAGATCAAACGGAAGGAAACACAAATAGAGTTGTTGGAACTTATGGGTACATGGCACCAGAGTATGCTATCGACGGGCTATATTCTATAAAATCCGACGTCTTTAGCTTTGGCATACTTATAATGGAGATTATATGTGGAACCAAAAATAGAGCTCTTTGCCATGCAAATCAGACTCTTAATCTCATTGGTTATGCTTGGAGGGTATGGAAAGAGGAGAAGGCTTTAGAGTTGATAGATTCAAGCATAAAGGAGTCATGTGTAATCTCAGAAGCATTGCGATGCATCCATGTGAGTCTGTTGTGTGTGCAACAATACCCTGAAGATAGGCCTACAATGGCTTCTGTGATTCTCATGTTAGGAAGTGAGATTGATTTAGTTGAGCCTAAAGAGCCTGGCTTCTTTCCCAAGAGGGTTTCTATCGAAGCGAATTCGCAGCCACATCAATGTGAAGTATCTACAAATGATGAATTAACCATTACCTCATTAGATGGCCGGTGA 2451 0.3847 MGVLHSIVMAAYILVSSVTASMAVNDSIGLSQYMSDGETLVSKNGLFELGFFRPGNSTNCYLGIWYKKMAMHAVVWVANRVDPINGFSGKLTMDDIGNLILKNNDSVVWSTASQREPQNPVAQLMDSGNLVIWNGGGAESDDILWQSFDYPTDTYLPGMKIGRDLRNGSDWRLTSWKSVDDPSPGNFSWGLALSDYPEFAIMNGTKKFSRFGPWNGMYFSGLPNVSVDSVIEFNYVDNQNEIYYTSSSKNDSIISRVVINQTSKAYSRYVWVEKTQTWSVFESLPSDVCDNYGHCGAYGGCMATGAPVCLCLRGFRPKSPEAWNSSNWAQGCVRNEPLNCTDGFVRYEGLKLPDTQRTRLIDTLDISDCRALCLNNCSCTAYTNPDIGTGGVGCVMWFGDLFDIKLFQSDGQDLYIRMPASQLVSNNELQHRSKNNKVIIASTVAAICGTFLLCVYVIYRFRRNSNEKSKMQEYMEGYVNDTDLPLFDLLTINIATDKFSFNNKIGQGGFGPVYKGKLAHGQEIAVKRLSHSSRQGMAEFITEVKLIAKLQHRNLVKLLGCCIQGEEKLLVYEYVVNGSLDTFIFDQEKSKLLDWPRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDDKLNPKISDFGMARTFGGDQTEGNTNRVVGTYGYMAPEYAIDGLYSIKSDVFSFGILIMEIICGTKNRALCHANQTLNLIGYAWRVWKEEKALELIDSSIKESCVISEALRCIHVSLLCVQQYPEDRPTMASVILMLGSEIDLVEPKEPGFFPKRVSIEANSQPHQCEVSTNDELTITSLDGR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02545 816 SMART blect_4 31 151 IPR001480 -
Adu08g02545 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Adu08g02545 816 ProSiteProfiles PAN/Apple domain profile. 340 419 IPR003609 -
Adu08g02545 816 Gene3D - 19 148 IPR036426 -
Adu08g02545 816 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02545 816 Gene3D Hepatocyte Growth Factor 335 416 - -
Adu08g02545 816 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 812 - -
Adu08g02545 816 Pfam D-mannose binding lectin 74 177 IPR001480 -
Adu08g02545 816 SMART ntp_6 339 418 IPR003609 -
Adu08g02545 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Adu08g02545 816 ProSiteProfiles Protein kinase domain profile. 499 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02545 816 Gene3D Phosphorylase Kinase; domain 1 460 574 - -
Adu08g02545 816 Pfam Protein tyrosine and serine/threonine kinase 500 767 IPR001245 GO:0004672|GO:0006468
Adu08g02545 816 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Adu08g02545 816 CDD PAN_AP_plant 337 419 - -
Adu08g02545 816 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Adu08g02545 816 CDD B_lectin 31 151 IPR001480 -
Adu08g02545 816 Pfam PAN-like domain 340 404 IPR003609 -
Adu08g02545 816 SUPERFAMILY Protein kinase-like (PK-like) 476 770 IPR011009 -
Adu08g02545 816 CDD STKc_IRAK 505 770 - -
Adu08g02545 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Adu08g02545 816 PANTHER - 24 812 - -
Adu08g02545 816 Gene3D Transferase(Phosphotransferase) domain 1 575 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02545 Adu-Chr8 41494032 41497345 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02545 438 796 Receptor kinase-like Gene Family AT4G23190 53.151 1.91e-129 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g02545 PK_Tyr_Ser-Thr 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02545 - - aip:107612694 1519.98