Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02536 ATGCACCGCCAGTATCTCAGATTTTTGAGTTCTGGTGATGATATTATTGATGACAATGATGATTGTGATGAGGATGAGGAGTGTTATGAGTACAGTGGTGATAATTTTGATAATAATTCTAAAAAGGATGTGAGGCAGATTGGGAGTGTTGAGACTGAATCTATTCCTAGAAAAAGGAGATCGCGCAGGAGACGCAGTGGAGGAAGTGATTCAGTAGAGAGTACTCTTGAGAAGTGGAAGGAGTACAATAAACAGCAGCAACAACTAATCAGTGAAAGAGATGGGGTTGAAGTAATTCACAAGGTTCCTAAAGGATCCAAAAGAGGGTGTATGAAAGGCAAAGAAATTCGCAAACCTATCAATAGCAAGAGTGTTGGTGAAGAAGCAAACAAACTTTGGCTTGGAACCTTTTCTACTGCACTTGAAGCTGCTCTTGCTTATGATGAAGCAGCAAGGACCATGTATGGCCCTGGCGCTCGTTTGAACTTTTCTCAGCATCATGGCATAGAATTAGTAGGTTCTAATGGATCATCTACTAGTCCAGTATTTGATCAGAAATCACCAAGTGAAACCTATATAGATACTTTGAATGGTGGTGATGTTGCAAAAGTTGACGGGTTGGAGGAAAATCTTGATATGGGTCTCGAAGAACAACTCAAATTTTCTGAGGTAAATGAATTATTGGAGATGGAATGTGAGGGAGGAATTCTTCAAGGGCCTTTTAAGTATGTAAAGGACGAAGTTGCTGGAGGAAGTGAAGGACTAGAAGGAGAGTTAGAGGAGGTTTTGAAAAACTCTGGTTTAGTTGAAGAGTGTAATAATTACATGCTAGAGGATTCTATGTGCATGGCTACGAATACAGGAGCTGATTATAACTCTTGTGATGCTACTGAACAGGGGATTATGGGGAAGAGTGAAGTGTAA 924 0.4026 MHRQYLRFLSSGDDIIDDNDDCDEDEECYEYSGDNFDNNSKKDVRQIGSVETESIPRKRRSRRRRSGGSDSVESTLEKWKEYNKQQQQLISERDGVEVIHKVPKGSKRGCMKGKEIRKPINSKSVGEEANKLWLGTFSTALEAALAYDEAARTMYGPGARLNFSQHHGIELVGSNGSSTSPVFDQKSPSETYIDTLNGGDVAKVDGLEENLDMGLEEQLKFSEVNELLEMECEGGILQGPFKYVKDEVAGGSEGLEGELEEVLKNSGLVEECNNYMLEDSMCMATNTGADYNSCDATEQGIMGKSEV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02536 307 MobiDBLite consensus disorder prediction 36 57 - -
Adu08g02536 307 SMART rav1_2 112 170 IPR001471 GO:0003700|GO:0006355
Adu08g02536 307 SUPERFAMILY DNA-binding domain 129 165 IPR016177 GO:0003677
Adu08g02536 307 MobiDBLite consensus disorder prediction 27 75 - -
Adu08g02536 307 CDD AP2 115 163 IPR001471 GO:0003700|GO:0006355
Adu08g02536 307 Gene3D AP2/ERF domain 90 165 IPR036955 GO:0003700|GO:0006355
Adu08g02536 307 ProSiteProfiles AP2/ERF domain profile. 92 164 IPR001471 GO:0003700|GO:0006355
Adu08g02536 307 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 58 114 - -
Adu08g02536 307 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 115 286 - -
Adu08g02536 307 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 58 114 - -
Adu08g02536 307 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 115 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02536 Adu-Chr8 41359275 41364069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02536 62 163 AP2-EREBP Transcription Factor Family AT2G40350 42.500 9.73e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02536 - - ahf:112708474 453.366