Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02534 ATGAGTTCAACTCTGACCAACCATCATCCTCTACTGTGTTCAATCTCCACCGCTTCAGCTTCAGCTCAACAACACAAACCCCTAACCAATTTTCCCGCCAAATCACAACGCTCAACTTTCTCAACCGTTAACTTCCTCCCCAACCACCCTCCTCCTCCTCCATCTTCAGGTCCAAATCTGGTGGTTGGAAGGAGAGGGCTAGTATCCATAGTCACTTTGCCATGTCTTGTTCCCCTGACTCAGATTATGGGTTGTCTCCAAGCGTACGCTGCACAGCCTAGTACAAAGGAATATCTTCTAATTAAAGAAGAAGTAAGGAAGGTATTGTCGAAGGGAAAAGCTGCAGGCGTGCTTCGTTTGGTTTTCCATGATGCAGGAACCTTTGACATGGATGACAAGACAGGTGGTATGAATGGTTCTATAGTTTATGAACTTGAAAGACCAGAAAATTCTGGCCTAAAAAAATCAATAAAGGTTCTGCAGAAAGCAAAGATTCAAATAGATGCTATCCAACCAGTATCCTGGGGGGACATGATTGCTGTTGCTGGCGCCGAAGCAATCGAATTATGTGGAGGTCCATCAATCCAAGTTTCTTTGGGCAGACTAGATTCACAGGGGCCTGACCCTGAAGGGAAACTTCCTGAGGAATCTCTCAATGCTTCCAGTTTGAAGAAATGCTTCCAGAGAAAAGGCTTTTCAACACAAGAACTTGTAGCTTTGTCTGGAGCCCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCAACTTCTTTTGACAATGCATATTATAAGATTCTTTTGGAGAAGCCTTGGGCAAATCCAGGTGGCATGTCAAGTATGATTGGCCTTCCTTCAGATCACGCACTTGTTGAGGATGACGAATGCTTAAGATGGATCAAGAAATACGCAGAAAATGAGAACATATTCTTTGAAGATTTCAAGAATGCATATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAATAACCTATAA 990 0.4364 MSSTLTNHHPLLCSISTASASAQQHKPLTNFPAKSQRSTFSTVNFLPNHPPPPPSSGPNLVVGRRGLVSIVTLPCLVPLTQIMGCLQAYAAQPSTKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDMDDKTGGMNGSIVYELERPENSGLKKSIKVLQKAKIQIDAIQPVSWGDMIAVAGAEAIELCGGPSIQVSLGRLDSQGPDPEGKLPEESLNASSLKKCFQRKGFSTQELVALSGAHTLGSKGFGSPTSFDNAYYKILLEKPWANPGGMSSMIGLPSDHALVEDDECLRWIKKYAENENIFFEDFKNAYVKLVNSGVRWNNL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02534 329 Pfam Peroxidase 103 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 ProSitePatterns Peroxidases active site signature. 114 125 IPR019794 GO:0004601
Adu08g02534 329 PRINTS Plant ascorbate peroxidase signature 114 129 IPR002207 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 PRINTS Plant ascorbate peroxidase signature 132 142 IPR002207 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 PRINTS Plant ascorbate peroxidase signature 172 190 IPR002207 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 PRINTS Plant ascorbate peroxidase signature 191 203 IPR002207 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 PRINTS Plant ascorbate peroxidase signature 212 229 IPR002207 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 PRINTS Plant ascorbate peroxidase signature 230 251 IPR002207 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 PRINTS Plant ascorbate peroxidase signature 300 324 IPR002207 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 Gene3D Peroxidase, domain 2 214 316 - -
Adu08g02534 329 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 28 326 IPR044831 GO:0004601|GO:0034599
Adu08g02534 329 SUPERFAMILY Heme-dependent peroxidases 101 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 ProSiteProfiles Plant heme peroxidase family profile. 114 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 Gene3D - 102 323 - -
Adu08g02534 329 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 28 326 - -
Adu08g02534 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 236 246 IPR019793 -
Adu08g02534 329 PRINTS Haem peroxidase superfamily signature 114 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 PRINTS Haem peroxidase superfamily signature 173 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 PRINTS Haem peroxidase superfamily signature 191 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu08g02534 329 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02534 Adu-Chr8 41319869 41324202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02534 114 327 Peroxidase AT4G16270 30.216 2.92e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02534 K00434 - gmx:100792735 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02534 08 41319869 41324202 Adu08g02534 08 41319869 41324202 ECH