Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu08g02526 | ATGGTACAGGCAAAGAAGTTCAGAGGTGTGAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAGATTCGCCACCCTCTCCTGAAGAGGAGGGTGTGGCTGGGAACATTTGAGACAGCAGAAGCAGCAGCAAGGGCTTATGATCAAGCAGCGATTTTGATGAATGGCCAAAATGCAAAGACCAATTTCCCTTCAACAAAGAACAACCAACAATCTCATCATCATAATAACAATGCAACAACAACAACAACTTCTTCTTCTTCTTCTTCTTGCAATGATGATTCTTCTTTCTTGTCTCCCAAGGCACTCTCAGAGCTTCTCAGTGCAAAGCTCAAGAAGTGCTGCGGCAAGGACCCTTCTTCTCCTTCCCTCACTTGTCTCCGCCTCGACGCCGACAACTCCCACATCGGCGTCTGGCAAAAGGGCCCCGGAAGACACTCCGATTCCAGTTGGGTCATGAGGGTTGAGCTTGGCAGCAAGAACCACAACCACCAACAAAAACAACACGAGGGTAATAAGGTCATTTTCCCATCTTCACCAAGTAATAATAACATCACTAACAACAACAATAATAATACTAATGTTGTTGTTATTGGAGAGAATGATGATGAAAATAGAATTGAAGAAGAGAACAGGGTTGCCATGCAGATGATTGAAGAGCTTCTTAATTGGAACAACTATCCATTTGGTAGTTCTTCAAGTAACAATAATAATAATAATTCTCAGCAGCAACAAGAAGATCAGAAAAGGAACCTTCCATGTCACAGTTCTTGA | 771 | 0.441 | MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPSTKNNQQSHHHNNNATTTTTSSSSSSCNDDSSFLSPKALSELLSAKLKKCCGKDPSSPSLTCLRLDADNSHIGVWQKGPGRHSDSSWVMRVELGSKNHNHQQKQHEGNKVIFPSSPSNNNITNNNNNNTNVVVIGENDDENRIEEENRVAMQMIEELLNWNNYPFGSSSSNNNNNNSQQQQEDQKRNLPCHSS | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu08g02526 | 256 | PRINTS | Ethylene responsive element binding protein signature | 7 | 18 | IPR001471 | GO:0003700|GO:0006355 | |
Adu08g02526 | 256 | PRINTS | Ethylene responsive element binding protein signature | 29 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
Adu08g02526 | 256 | SUPERFAMILY | DNA-binding domain | 6 | 64 | IPR016177 | GO:0003677 | |
Adu08g02526 | 256 | CDD | AP2 | 5 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Adu08g02526 | 256 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 | 1 | 225 | - | - | |
Adu08g02526 | 256 | SMART | rav1_2 | 6 | 69 | IPR001471 | GO:0003700|GO:0006355 | |
Adu08g02526 | 256 | Pfam | AP2 domain | 6 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
Adu08g02526 | 256 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 1 | 225 | - | - | |
Adu08g02526 | 256 | Gene3D | AP2/ERF domain | 5 | 64 | IPR036955 | GO:0003700|GO:0006355 | |
Adu08g02526 | 256 | MobiDBLite | consensus disorder prediction | 228 | 256 | - | - | |
Adu08g02526 | 256 | MobiDBLite | consensus disorder prediction | 58 | 93 | - | - | |
Adu08g02526 | 256 | ProSiteProfiles | AP2/ERF domain profile. | 6 | 63 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu08g02526 | Adu-Chr8 | 41216017 | 41217349 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu08g02526 | 1 | 223 | AP2-EREBP Transcription Factor Family | AT5G25390 | 53.363 | 1.83e-69 | 210 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Adu08g02526 | AP2 | 2.6e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu08g02526 | - | - | lang:109326202 | 244.588 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu08g02526 | 08 | 41216017 | 41217349 | Adu08g02526 | 08 | 41216017 | 41217349 | ECH | |
Adu01g03003 | 01 | 100869546 | 100870693 | Adu08g02526 | 08 | 41216017 | 41217349 | ECH |