Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02506 ATGGATTCCTCTCATGAACCTTCATCATCACCACTATTTTCTGATTCTTCCAATAATCTCAACAATAATAATGAAATAATGGATCGTCCCTCTGATGATCTAGAATCTTCCAAGAACAAGAACAATGAAGACACTACTACTATTCCCTCCTCCTTTTCCCCTTTTGAATCCTCCAATCCCAGCATCAGCAATGAAGTAGAAAATTCATCTCCATCAAAGCATCATCATGAATATGATCATGATCTTAATGATGATGATTACTTTCTTGGTGAATCATACACACCAGAGCTTGTTCTGTCACCAGAAACCCAATCAATCTTATTAAGTGGCCTACGTATTGGAGACGATGGTGATCTTCTTGAAGATCTTTGTGATAACAACTTCGAATTTAATGTGGAATCATCACAAGAATGGATAGATAGCAATTTGTTTGCAGATGAGATTCTAGGAATCGAACCTTCCCTTGATCATTATTATTCACCCTACCCCACGGGTAATGAAGAGGACATTGACCTTATGGAAACAGTGCAATGTGATGATGAAGTGAATAATAGCGACCTTGTAATAATTGATGCACCAATTCAGGAAGAGGAAGCACCAAACTTCAAGTTGAAGCCTTTTGGTTTGCATTTGAATAGGCTCATAAAATCTACAAAAAGGGTTCATCCTGAGACACATGAAAATGTTGTAGTTGGGAGTAGTAGTAGTAGTAATAATAAAATAAAAAGCATTTTGATCTCACAAGGTAGCAATGGAAAATCAGTAGTAAGAGCTGTTGTTGATGAGACTCAGAGCCATCAAGACACCACTTCCAATGATTGTGTTCTCATTTCTCATGATCTTAACAAGACAATAATCCAAGAGAATAGTGAGAGTAATAATGGTTGTACATGTAAGAAGAGTGCATGCTTGCTCCTGTACTGTGAATGTTTTGCTGCTAAAGGTTATTGTGCAGAGTGTTGTACTTGTGAAGGATGCTTAAACAGACAAGAACATGAAGACAAAGTTAACGATGCTAGGGACAAAATCAAATCTCGTAATCCATTTGCATTTTCTCCTGAGATGGTTCCATCGGCTAGTAACCAAGAAGAAGAACATGAAGCAGCCAAAGATACATCAAGAGAATTGAAACCAAGTAAATTCTTCACTTATTTGCCACGTGTCGGTTTAGTAGAATCAAACACCATCAGCACTAATTCTACAAAACATGATGCTGATGATGACAACATTTCTAAAGAGAAACTTAACCAAACTGGTGGAGGATACAAAAAACATGCATCAAACACAAGTGATGGTAAAAGAGGATGTACATGTAAGAAGAATAAATGTGTGAACCTTTATTGTGAATGTTTTCGTGCTGAAATCTACTGTTCTGAGGCTTGTGCTTGCGAAGGGTGCTTAAATAGAGAAGAACATTTACACAAAATTAATGAAGCTAAGGAATATATTAAAAGGCGTTATCCATTAGCATTTGCTCCAAGGATTGTTCAAACTCATCTTTCCTCCCCCAATAATACGGATAATGAAAATGTTAAGACAGCATCATCATCATCAGCAGCAGCAAGGCACAAAAGAGGTTGCAGATGCATAAAGTCAAATTGTATGCAGAAGTATTGTGTATGTTTTGAGGTTGAGGTTGGATGCTCCAGTCTTTGTGAATGCAAGGAATGCAAAAATCCATATGGCAAGAACAAAGATTCAGGTCATTAG 1710 0.3713 MDSSHEPSSSPLFSDSSNNLNNNNEIMDRPSDDLESSKNKNNEDTTTIPSSFSPFESSNPSISNEVENSSPSKHHHEYDHDLNDDDYFLGESYTPELVLSPETQSILLSGLRIGDDGDLLEDLCDNNFEFNVESSQEWIDSNLFADEILGIEPSLDHYYSPYPTGNEEDIDLMETVQCDDEVNNSDLVIIDAPIQEEEAPNFKLKPFGLHLNRLIKSTKRVHPETHENVVVGSSSSSNNKIKSILISQGSNGKSVVRAVVDETQSHQDTTSNDCVLISHDLNKTIIQENSESNNGCTCKKSACLLLYCECFAAKGYCAECCTCEGCLNRQEHEDKVNDARDKIKSRNPFAFSPEMVPSASNQEEEHEAAKDTSRELKPSKFFTYLPRVGLVESNTISTNSTKHDADDDNISKEKLNQTGGGYKKHASNTSDGKRGCTCKKNKCVNLYCECFRAEIYCSEACACEGCLNREEHLHKINEAKEYIKRRYPLAFAPRIVQTHLSSPNNTDNENVKTASSSSAAARHKRGCRCIKSNCMQKYCVCFEVEVGCSSLCECKECKNPYGKNKDSGH 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02506 569 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 373 564 IPR044522 GO:0003700
Adu08g02506 569 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 434 469 IPR005172 -
Adu08g02506 569 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 294 329 IPR005172 -
Adu08g02506 569 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 525 559 IPR005172 -
Adu08g02506 569 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 373 564 - -
Adu08g02506 569 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 207 367 IPR044522 GO:0003700
Adu08g02506 569 MobiDBLite consensus disorder prediction 349 374 - -
Adu08g02506 569 ProSiteProfiles CRC domain profile. 432 562 IPR005172 -
Adu08g02506 569 MobiDBLite consensus disorder prediction 41 68 - -
Adu08g02506 569 MobiDBLite consensus disorder prediction 1 87 - -
Adu08g02506 569 ProSiteProfiles CRC domain profile. 292 355 IPR005172 -
Adu08g02506 569 MobiDBLite consensus disorder prediction 69 87 - -
Adu08g02506 569 MobiDBLite consensus disorder prediction 360 374 - -
Adu08g02506 569 SMART CXC_2 522 563 IPR033467 -
Adu08g02506 569 SMART CXC_2 291 332 IPR033467 -
Adu08g02506 569 SMART CXC_2 431 472 IPR033467 -
Adu08g02506 569 MobiDBLite consensus disorder prediction 399 434 - -
Adu08g02506 569 MobiDBLite consensus disorder prediction 1 27 - -
Adu08g02506 569 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 207 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02506 Adu-Chr8 41012386 41016642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02506 399 567 CPP Transcription Factor Family AT4G14770 40.230 1.85e-34 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Adu08g02506 TCR 3.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02506 K21776 - gmx:547664 170.629