Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02497 ATGAGAAGGCGTGGAAAGAAGGTATTTGCAAGATTGTGTGGTGGTATCCGTGGTGGTGACGACGACGAGGACGAAGAAGACACCTTTCCTGAGAGCCAAAGGAGGGATCACATTGCGGAGTTTGATTATGAAGGAAGCCAATACAGCCTCGCCGGTCTTCCGCTTCCCTCGCTCGGCTCCACTTCCCACAGACTCAAGCTCCGTCCTTACATTGTTTCTCCCTTCAACCACCATTACAGACTTTGGCAGACATTTCTGGTGTTCTTGGTGTTCTACAATGCATGGGTTTGTCCATTTGAATTTGCATTCCTTAACCAAAAAATGGTCGCAATCTTCATAGCTGACAATGTTGTCAATGGATTCTTTGCTGTTGACATTGTTCTCACCTTCTTTGTTGCATACCTAGACAAGACTACCTATTTGCTAGTTGATGATAAAAGCCTAATTGCTTTGAGATATGCAAAATCATGGTTGGCTTTAGATGTCATCTCCACTATCCCCTCTGAAGTTGCTCATAGGTTTTTGCCCGCTGCCCTGAAAAAATATGCTTACTTCAACATGCTTCGCCTTTGGCGTCTTCGCCGAGTCAGTGCCTTGTTTGCAAGATTAGAGAAGGACAGGCATTATAATTACTTCTGGGTTCGCTGCTCAAAACTGATCTGTGTTACATTATTCGCAGCTCATTTTGCTGCTTGCATTTTCCATTTTATCACTCTGAATCGTGAAAACGGACAAACATGGCTTTCGCTTCTTCCGGAAGTCGATGATCATAGTGTCACATCCCTCTATATAGCATCAATTTACTGGTCCATATCAACTCTTACAACGGTTGGTTATGGAGATCTACATCCTACGAACACAAGGGAGACTCTTTTTGATACTTTCTATATGCTCTTCAATCTTGGGCTAACTGCATATCTCATAGGTAACATGACAAATTTGGTCGTCCATGGGACAAGCAGAACTAGGAAATATAGAGACACAATTCAAGCTGTGACAAGTTTTGCCAAACGGAATAAATTGCCTGTTCTCATGCAAGAACAGATGATTGCACATTTGCATATGAAGTACAGAACTGATATAGAAGGGCTGCAGCAGCAAGAGATTATCGAATTACTCCCGAAAGCTATTCGTTCTAGCATCTCTCATTACCTATTCTATGAAATTTTGGAGGATATCTACTTGTTTAATGGGGTGTCACATGATCTGCTTTTTCAACTGGTCTCAGAGATGAAGCCCGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAGAATGAAGCACCAACAGACTTCTATGTATTGGTCACTGGTGCTGTGGTAGTTGGTGAGATAAAGGCAGGAGAATTAGTTGGAGAAGTCGGAGTTTTATGTTACAGGCCCCAGATGTTTACAGTTCGGACCAAACGATTGTGCCAACTTCTGCGCTTGAGCCGGACTACATTTATAAATCTTGCTCACTCCAATGTTGGAGATGGGACAATTATGATGAACAATTTTCTCAAGCATTTGCATGAATCCCAGGCACCAGGGATGGATATAATTTTCCGAGAGACAGAGGCCATGCTGGCACGTGGTAAATTGGATTTGCCTATCAGCACATGCTTTGCAGTAAACCGAAATGATGATATATTGTTGCAACGGCTGCTGAAGAAGGGTATGGATCCAAATGAAGGCGACCCAGATGGAAGGACACCGCTGCATATTGCAGCTTCTAAAGGCAATGAGAAGTGTATATCTGTGCTTCTGGAATATGATGCTGATCCCAACATCAGAGATAAGGAAGGAAATCTTCCACTGTTTGAAGCACTTATAAGTGGTAACGACTCCATTGTGAAACTCCTTCTGGAGCATGGTGCAGTATTAGAACCTGCCGATGCAGGCCACCTGGCATGCATTGCTGTTGAGAAAAATAGCATGGAACTGCTCAAAAGAATTTGTCAATATGGTTGGGATGTGACACAACCCACACACAATGGAACCACTGCTCTTCACACTGCAGTGTGTGAAGGAAACCTCCAAATGACAAAGTTCCTTGTCGAAAAAGGAGCCAACATTGATCTGCAAGACGCTACCGCTATTCCACCATCAAATCGCAAGCACTTGCCTAACCTTGGAAGGTACCAAAGTGAACCAACTATGCGTAGTATTCCCCAAACAAACATTGGACAGTTCCGCTCGCCACGCAATCCAGAAGATATGTTCTTTGACAATACTAAAAGAAGAAGAAACAACAATTTTAACAATTCCATTTTTGGGATGATGTCGGCAGCTAACCATAATCAAAGAGAGCGTGAGGCATCCAAAAAATTTAACAATAATAGGTGGAACAAGGATGACTTTGTTGGCAGAGTGACATTAAGTTGTCCTGAAAAGGGTGAACATGCTGGAAAGCTTGTTATGCTGCCAAATACCATTCAGGAACTGCTAGATATTGGAGCTAAAACGTTTGACTTTACTGCTGTCAAAATTTTGACCAAAGAAGGAGCTGAAGTGGATGATATAAATCTTATAAGAGATGGTGATCATCTTATTATTGCACATACATGA 2550 0.4243 MRRRGKKVFARLCGGIRGGDDDEDEEDTFPESQRRDHIAEFDYEGSQYSLAGLPLPSLGSTSHRLKLRPYIVSPFNHHYRLWQTFLVFLVFYNAWVCPFEFAFLNQKMVAIFIADNVVNGFFAVDIVLTFFVAYLDKTTYLLVDDKSLIALRYAKSWLALDVISTIPSEVAHRFLPAALKKYAYFNMLRLWRLRRVSALFARLEKDRHYNYFWVRCSKLICVTLFAAHFAACIFHFITLNRENGQTWLSLLPEVDDHSVTSLYIASIYWSISTLTTVGYGDLHPTNTRETLFDTFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKYRDTIQAVTSFAKRNKLPVLMQEQMIAHLHMKYRTDIEGLQQQEIIELLPKAIRSSISHYLFYEILEDIYLFNGVSHDLLFQLVSEMKPEYFPPKEDVILQNEAPTDFYVLVTGAVVVGEIKAGELVGEVGVLCYRPQMFTVRTKRLCQLLRLSRTTFINLAHSNVGDGTIMMNNFLKHLHESQAPGMDIIFRETEAMLARGKLDLPISTCFAVNRNDDILLQRLLKKGMDPNEGDPDGRTPLHIAASKGNEKCISVLLEYDADPNIRDKEGNLPLFEALISGNDSIVKLLLEHGAVLEPADAGHLACIAVEKNSMELLKRICQYGWDVTQPTHNGTTALHTAVCEGNLQMTKFLVEKGANIDLQDATAIPPSNRKHLPNLGRYQSEPTMRSIPQTNIGQFRSPRNPEDMFFDNTKRRRNNNFNNSIFGMMSAANHNQREREASKKFNNNRWNKDDFVGRVTLSCPEKGEHAGKLVMLPNTIQELLDIGAKTFDFTAVKILTKEGAEVDDINLIRDGDHLIIAHT 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02497 849 ProSiteProfiles Ankyrin repeat region circular profile. 595 620 - -
Adu08g02497 849 Pfam KHA, dimerisation domain of potassium ion channel 784 846 IPR021789 -
Adu08g02497 849 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 37 694 - -
Adu08g02497 849 SUPERFAMILY cAMP-binding domain-like 320 504 IPR018490 -
Adu08g02497 849 Pfam Ion transport protein 80 322 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu08g02497 849 Gene3D Jelly Rolls 386 518 IPR014710 -
Adu08g02497 849 PRINTS EAG/ELK/ERG potassium channel family signature 263 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu08g02497 849 PRINTS EAG/ELK/ERG potassium channel family signature 307 316 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu08g02497 849 PRINTS EAG/ELK/ERG potassium channel family signature 115 125 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu08g02497 849 PRINTS EAG/ELK/ERG potassium channel family signature 126 135 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu08g02497 849 SMART cnmp_10 395 501 IPR000595 -
Adu08g02497 849 ProSiteProfiles Ankyrin repeat profile. 595 627 IPR002110 GO:0005515
Adu08g02497 849 PANTHER POTASSIUM CHANNEL AKT1 694 848 IPR045319 GO:0005249|GO:0006813
Adu08g02497 849 PANTHER POTASSIUM CHANNEL AKT1 37 694 IPR045319 GO:0005249|GO:0006813
Adu08g02497 849 SMART ANK_2a 805 834 IPR002110 GO:0005515
Adu08g02497 849 SMART ANK_2a 626 655 IPR002110 GO:0005515
Adu08g02497 849 SMART ANK_2a 595 624 IPR002110 GO:0005515
Adu08g02497 849 SMART ANK_2a 562 591 IPR002110 GO:0005515
Adu08g02497 849 SMART ANK_2a 529 558 IPR002110 GO:0005515
Adu08g02497 849 SMART ANK_2a 659 688 IPR002110 GO:0005515
Adu08g02497 849 CDD CAP_ED 395 497 IPR000595 -
Adu08g02497 849 SUPERFAMILY Ankyrin repeat 536 691 IPR036770 -
Adu08g02497 849 Pfam Cyclic nucleotide-binding domain 414 488 IPR000595 -
Adu08g02497 849 ProSiteProfiles Ankyrin repeat region circular profile. 659 690 - -
Adu08g02497 849 ProSiteProfiles cAMP/cGMP binding motif profile. 395 503 IPR000595 -
Adu08g02497 849 Gene3D Helix hairpin bin 318 384 - -
Adu08g02497 849 ProSiteProfiles Ankyrin repeat region circular profile. 562 594 - -
Adu08g02497 849 ProSiteProfiles Ankyrin repeat profile. 562 594 IPR002110 GO:0005515
Adu08g02497 849 ProSiteProfiles Ankyrin repeat profile. 659 691 IPR002110 GO:0005515
Adu08g02497 849 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 694 848 - -
Adu08g02497 849 SUPERFAMILY Voltage-gated potassium channels 74 316 - -
Adu08g02497 849 PRINTS Ankyrin repeat signature 675 689 IPR002110 GO:0005515
Adu08g02497 849 PRINTS Ankyrin repeat signature 563 578 IPR002110 GO:0005515
Adu08g02497 849 Pfam Ankyrin repeats (3 copies) 536 621 IPR002110 GO:0005515
Adu08g02497 849 Pfam Ankyrin repeats (3 copies) 633 690 IPR002110 GO:0005515
Adu08g02497 849 Gene3D - 531 698 IPR036770 -
Adu08g02497 849 ProSiteProfiles KHA domain profile. 784 849 IPR021789 -
Adu08g02497 849 Gene3D - 80 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02497 Adu-Chr8 40922465 40928274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02497 31 847 Ion Channels AT2G25600 53.442 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02497 K21867 - gmx:100802964 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02497 08 40922465 40928274 Adu08g02497 08 40922465 40928274 ECH