LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g02496	ATGGGGAAGTTGGGAACCCCATTTAAGGGAATAATTCAAGATGTAAAAGGAAGAGCTGAATGCTACAAGCAAGATTGGGTTTTGTCATTCTGCTCTGGTCTAAGATTATTGGCTCCAACATTCTACATATTCTTTGCTTCTGCTCTCCCTGTCATTGCTTTTGGAGAACAACTAAGTAGAGATACAGATGGAAGCTTGAGCACTGTAGAAGCATTGGCATCTACTGCAATTTGTGGAATTATTCACTCTATAATTGGTGGCCAGCCTTTGTTGATTGTAGGAGTTGCTGAACCAACTGTTATAATGTACAGTTATCTCTACAATTTCAGCAAGAAAACACCTGAACTTGGTGCAAAACTCTTTCTGCCTTGGGCTGGATGGGTTAATGTATGGAGTGCACTCTTCTTGATTGTGCTTGGGATTTTTAATGCTTGCACTGTGATAACGAGGTTTACAAGGGTTGCGGGGGAGTTGTTCGGCATGCTAATTACTGTTCTTTTCTTTCAACAGGCTATTAAGGGATTGGTTGAGGAGTTCGGCACGCCGAAGAATGAAAACCAGTTGGCAGAAGAGTTTCAATTCCAATGGAGGTACATTAATGGATTGCTTGGAATCATTTTCTCTTTTGGAGTACTTGTCACTTCCCTTAAAACCAGAAAAGCAAGAACATGGCTATATGGAACAGGGTGGCTACGAAGTTTTATTGCAGATTATGGGGTTCCATTGATGGTAGTGTTATGGACTGCACTGTCTTATGTTGTGCCAGGCAAAGTTCCCGAAGGTGTTCCTCGAAGGTTGGTTTCTCCGCTTCCTTGGGAATCTGCATCTCTGTATCACTGGACAGTAGTGAAGGATATGGGGCAGGTTCCCTTTCTTTACATAGTTGCGGCAATTATTCCGGCTTTCATGATAGCAGGACTATACTTTTTCGATCATAGTGTATCTTCCCAGATGGCTCAACAGGAGGAATTCAATCTTCAAAAGCCATCTGCCTACCACTATGATATGTTTCTGCTTGGAATAATGACTTTGATTTGCGGTCTCCTCGGCCTTCCTCCATCAAATGGAGTCATTCCGCAATCCCCCATGCATACAAAGAGTTTGGCAGTTCTTAGAAAGCAGTTGATCCGAAAGGAAGTGGTAAAAAGTGCCAAGGAATGCATTAAGCTGAAAAAGACAAAGTCTGAAATATATGGCAAGATGCAGGCTGTCTTTGAAGAGATGGATACAGATCCTACTGCCAAAGAGTTGGAGAATTTGAAGGAAGCTGTAATGAACCCTGATGCCAAGGATGGTACAAAGAAAAATTTTGATCTTGAGGAACACATAGATGACTATCTGCCAGTCCGGGTTAATGAGCAAAGAATGACCAACTTAATGCAGTCCCTTCTGATTGGCCTCTCAGTTTTGGCCATCTCTATTATCAAAAGGATACCTACCTCGGTTTTATGGGGATATTTCGCTTACATGGCAATCGATAGTCTACCAGGGAATCAGTTTTGGGAAAGGATATTGCTTCTCTTCATCGCTCCAAGACGACGTTCTAGAATTTTGGAAGGTTCTCATGCCTCATTTGTGGAGACAGTACCATTCAAGACCATAGCCGCTTTTACTGGCTTCCAGTTAGCATATTTCGCAGTCTGTTATGGAATGACATGGATACCTATAGGTGGAATTTTGTTTCCACTACCATTCTTCCTTCTCATACTTGTAAGGGAGCACCTGCTTCCAAGACTCTTCAAACCTCGAGATCTTCAAGAACTAGACGCTTCCGAATATGAGGAGATTCTTGGTGCTCCACGCGGTTCCCTTAGTATGTCACTGCAGGATAAGGAACTGGGCGATAGCGATGAGAGTGTAGAAGATTATTGTGATGCTGAGATATTGGATGAGATGACAACCAGTAGGGGAGAGTTGAAACTCAGAGCTGTGAGCTTCAATGATGGGAACTCCAACAATGATGGAAACCGCAGTTTCAATGTTAGAAATCGCAGCTTCAATGTTAGAAATCGCCGCAGCTTCAATGCTAGATACCGCCACAGTTTCAATGATAGATACCTCCATAGCTTCAATGGAAATGCTGTTTGA	2088	0.4267	MGKLGTPFKGIIQDVKGRAECYKQDWVLSFCSGLRLLAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVEALASTAICGIIHSIIGGQPLLIVGVAEPTVIMYSYLYNFSKKTPELGAKLFLPWAGWVNVWSALFLIVLGIFNACTVITRFTRVAGELFGMLITVLFFQQAIKGLVEEFGTPKNENQLAEEFQFQWRYINGLLGIIFSFGVLVTSLKTRKARTWLYGTGWLRSFIADYGVPLMVVLWTALSYVVPGKVPEGVPRRLVSPLPWESASLYHWTVVKDMGQVPFLYIVAAIIPAFMIAGLYFFDHSVSSQMAQQEEFNLQKPSAYHYDMFLLGIMTLICGLLGLPPSNGVIPQSPMHTKSLAVLRKQLIRKEVVKSAKECIKLKKTKSEIYGKMQAVFEEMDTDPTAKELENLKEAVMNPDAKDGTKKNFDLEEHIDDYLPVRVNEQRMTNLMQSLLIGLSVLAISIIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFIAPRRRSRILEGSHASFVETVPFKTIAAFTGFQLAYFAVCYGMTWIPIGGILFPLPFFLLILVREHLLPRLFKPRDLQELDASEYEEILGAPRGSLSMSLQDKELGDSDESVEDYCDAEILDEMTTSRGELKLRAVSFNDGNSNNDGNRSFNVRNRSFNVRNRRSFNARYRHSFNDRYLHSFNGNAV	695

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Adu08g02496	695	PANTHER	ANION EXCHANGE PROTEIN	4	668	IPR003020	GO:0005452\|GO:0006820\|GO:0016020
Adu08g02496	695	Gene3D	Helical hairpin bin	18	60	-	-
Adu08g02496	695	PANTHER	BORON TRANSPORTER-LIKE PROTEIN	4	668	-	-
Adu08g02496	695	Pfam	HCO3- transporter family	7	182	IPR011531	GO:0006820\|GO:0016021
Adu08g02496	695	Pfam	HCO3- transporter family	201	374	IPR011531	GO:0006820\|GO:0016021
Adu08g02496	695	Pfam	HCO3- transporter family	449	539	IPR011531	GO:0006820\|GO:0016021

Showing 1 to 6 of 6 entries

Previous1Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g02496	Adu-Chr8	40917231	40921201	Dispersed/Proximal

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu08g02496	7	648	Antiporters	AT5G25430	65.692	0.0	900

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g02496	K24194		-	gmx:100787412	1044.26

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Adu08g02496	08	40917231	40921201	Adu08g02496	08	40917231	40921201	ECH
Adu08g02496	08	40917231	40921201	Adu07g02501	07	79225291	79229157	ECH
Adu08g02496	08	40917231	40921201	Adu06g02784	06	104970796	104974616	ECH
Adu06g02784	06	104970796	104974616	Adu08g02496	08	40917231	40921201	PCT

Showing 1 to 4 of 4 entries

Previous1Next