Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02489 ATGTGGTCAGCCACAGCATGTTACGGTAAAGACGCATCGGAGTTTCCATCGAGCAACATGTTTGCATCAGCAGGAGAAGGCATATGGGACAATGGTGCTGCATGTGGTAGGCAGTATCAGGTGAGGTGCATCAGTGCAGCCGCACCTAGAACCTGCATTCCTGGCCAGTTGATCCAGATCAAGATCGTCGATCGCGCGCAATCAACGGTCTCTAGGCCTTCCAGGGATGGAACTTCCATGGTCCTCTCCACCACTGCATTCCAGGCCATTGCAAATGCCTCTGCTTCTTTGATCAACATTGAATTTCAACAGGTTTAA 318 0.5063 MWSATACYGKDASEFPSSNMFASAGEGIWDNGAACGRQYQVRCISAAAPRTCIPGQLIQIKIVDRAQSTVSRPSRDGTSMVLSTTAFQAIANASASLINIEFQQV 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02489 105 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 4 105 IPR007112 -
Adu08g02489 105 SUPERFAMILY Barwin-like endoglucanases 4 105 IPR036908 -
Adu08g02489 105 Pfam Lytic transglycolase 28 101 IPR009009 -
Adu08g02489 105 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 3 105 - -
Adu08g02489 105 Gene3D - 1 105 IPR036908 -
Adu08g02489 105 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 3 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02489 Adu-Chr8 40846412 40847906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02489 1 105 Expansin Gene Family AT3G45970 29.310 2.72e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02489 - - lja:Lj1g3v1914930.1 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02489 08 40846412 40847906 Adu08g02489 08 40846412 40847906 ECH