Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02463 ATGGTAGAATCACATGACACCACTGGTGAACATTGTATGTCCAATAGCATAAGAGAACATGGTATAGCAGACAACGTGCTTTCGGTGCAAGACACTGCGAAATCTGATGGTCCGAGCTCTCCAAATAAAGACATAGATATGATTTGTGAGAAACTAGGAGCATCAGATTGCTTGGCCATTGTGGACATTGATTCCGAGATAAAGGATCCTGAAGTTTGGAGTTCTTATGCACCTGAAATATACAATAATATTCGTGTCACAGAGCTCTCAAGAAGACCAATATCGAATTACATGGGAGAGTTGCAGCAAGATATCAGTCCTACCATGAGGGGAATTTTGATTGATTGGCTTGTGGAGGTTACCGAGGAATATAACTTGGTTCCAGACACACTTTACCTTACAGTAAACCTCATTGATAGGTATCTCTCAGCAAAATTGATGCAGAAACAAAGACTCCAGTTGCTTGGTGTTACTTGCATGCTCATTGCATCAAAGTATGAAGAGATTTGTGCTCCTAGAGTGGAGGAATTTTGCTTCATCACAGATAACACTTACACAAAAGAAGAGGTATTGAAAATGGAGAGTGAAGTTCTAAACATTTTGCATTTTCATTTATCTGTTCCAACAACCAAAACATTTCTGAGGTATATTATATCAAAACCATCAATCTCTTCGCAGGTTCCTCACATCGAATTGGAATTCCTGGCAAATTATTTAGCAGAGCTTACCCTTGTTGAGTACAGTTTCTTGCAGTTTCTACCTTCCCTTATAGCTGCATCTGCTGTGTTCCTTGCAAGATGGACTTTAAACCAATCAGAACATCCATGGAATCTAACTCTGGAGTACTATACAAACTACAAAGCCTCAGAGCTTGAAACTGTTGTTCTTGCACTTGTAGATTTGCAGCTCAACACCAAAGCCAGTTCCTTGAATGCTATACGTGAAAAGTATAAACAACATAAGTTCAATTGTGTGGCAACACTGTCTCCAAATCCAAAACCAGTGCAATCGCTCTTCCAAGTTTCAAGTGTAAATTAA 1038 0.3931 MVESHDTTGEHCMSNSIREHGIADNVLSVQDTAKSDGPSSPNKDIDMICEKLGASDCLAIVDIDSEIKDPEVWSSYAPEIYNNIRVTELSRRPISNYMGELQQDISPTMRGILIDWLVEVTEEYNLVPDTLYLTVNLIDRYLSAKLMQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKEEVLKMESEVLNILHFHLSVPTTKTFLRYIISKPSISSQVPHIELEFLANYLAELTLVEYSFLQFLPSLIAASAVFLARWTLNQSEHPWNLTLEYYTNYKASELETVVLALVDLQLNTKASSLNAIREKYKQHKFNCVATLSPNPKPVQSLFQVSSVN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02463 345 CDD CYCLIN 206 299 IPR013763 -
Adu08g02463 345 PANTHER CYCLIN-A2-4 24 339 - -
Adu08g02463 345 PANTHER CYCLINS 24 339 IPR039361 -
Adu08g02463 345 ProSitePatterns Cyclins signature. 110 141 IPR006671 -
Adu08g02463 345 SMART Cyclin_C_2 208 331 IPR004367 -
Adu08g02463 345 Gene3D - 93 206 - -
Adu08g02463 345 CDD CYCLIN 109 198 IPR013763 -
Adu08g02463 345 SUPERFAMILY Cyclin-like 207 330 IPR036915 -
Adu08g02463 345 Gene3D - 79 327 - -
Adu08g02463 345 Pfam Cyclin, N-terminal domain 79 205 IPR006671 -
Adu08g02463 345 Pfam Cyclin, C-terminal domain 208 330 IPR004367 -
Adu08g02463 345 SUPERFAMILY Cyclin-like 69 205 IPR036915 -
Adu08g02463 345 SMART cyclin_7 212 300 IPR013763 -
Adu08g02463 345 SMART cyclin_7 115 199 IPR013763 -
Adu08g02463 345 PIRSF Cyclin_A_B_D_E 13 343 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02463 Adu-Chr8 40429131 40434840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02463 22 339 Core Cell Cycle Gene Families AT5G25380 61.442 8.39e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02463 K06627 - gmx:547780 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02463 08 40429131 40434840 Adu08g02463 08 40429131 40434840 ECH