Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02439 ATGGAGGACCAAGCGAATCAGAACCAAAGCCAAGGTCCTCCACCGCCGCAGCCTCCACCACTTCCGGCTCCGGAATCTGAACCACCGGTGGAGGAGGAGGAAGAGGATGAAGAAGACGATTCCAAGAAAGAGGAAGAGGAACTTGTCGCCAAGGTTAACAGGCTCATGGAGAAGATTATTTCTGCGCCCGATAACCCTAAGCCCGCGGTTCTCCACGCCCTGGCCTCTATCCTCGAAACGCAAGAGTCACGATACATGGAAGAGAATGGTTATTCTTCTTCAAGTAATGCCCGTGCTGCCCATAACATTGGGCGCCTTGGGAGCTTAATTCGGGAAAATGACGAGTTCTTTGAGTTGATATCTTCGAAGTTTCTGGCAGAATCGACGTACTCAACTGCCGTTCAAGCTGCCACTTGTAGACTTCTCTTATGCTGTTCACTGACTTGGATTTATCCTCATGTTTTTGACGAACCTGTACTGGACTGCATCAAAGAGTGGGTGCTGGATGATAATGGTAGACTATCTGCTGAAGAGCAAAATCTGAAGCATAACTCAGGGAGAAGGGATGCCTCAGATTCTGAAATGTTGAAAACCTATTCAACAGGAGTTCTTGCTGTGTGTTTGGTTAGCGGAGGTCAAGTTGTGGAGGATGTATTGACATCTGGATTGTCAGCTAAGCTCATGCGTTATCTCCGTCTGCGTGTGCTTGGTGAGACAAGTAGCAGCCAGAAAGAAATTACTCATGCAACAGATAGTAGGCATGCATCAGGGAATAGTTCAGTCAGAGTTAGAGATGATGGTCGTGGAAGATTTCGCCAGCTCTTGGAACCTTGTCATTTAGATGATTCACGGATGGTTGATGATAGATCTTTAGATGATGTATCTCTTGAAAGGGGTCTTGATAAAAGCATTAGTGGACAAGAAGATTCCTGGGTTGATGGCGAGCCCCCTGACTTGCTTGGCAAAAATGCTGATATCCGTGAGGCAGATGCTGATGATGAGGATAGATGGCACTGTACAGATATAAGTGATGGAAGGATGAAATACGGCGAGCATGATGACAATTTGAGAGATGATTCTTCGAGAAGGCGCACAAATCGTGGATGGGGAAGATCCAAAGGAAAAGGAAGGGTCAACGAAGGGACTGTAGAAAGTGAAGCCATTGTTTCATCACCTGGTTCTGGTAGTCGACTAGGGCAGGGACGTAGTGTCAGAGATAGGACCATGCAGAGGAATGTCGATGTTAGAAGGGTGCCTGATTCTAAAAAGAATGCTAGGACGACTTCAGATGCTTCTGTTTTGGAAAGAGGGGATAATGATGATTGCTTCAGAGACTGCCGTATTGGAAGTAGAGATATTTCTGATATTGTTCGGAAAGCAATCTGTGCTGCTGAAGCTGAAGCCAGATCTGCCAATGCACCTGATGAAGCTGTTAAAGCAGCTGGTGATGCGGCTGCTGACCTTGTTAAAACCACAGCTTCAGAGGAGTTTAAATCCACTAATGATGAAGATGCTGCTGTTTTGGCTGCTTCAAGGGCTGCATCCACTGTTGTTGATGCTGCATCTGCAGTTGAGGTTTCAAGGAGCTCCATTAGTATCAATACTGAAACAGAGAATGTGAGTGGTACAGAACCGGAAATTGTTGAGGATGTTGAAGAGTACTTCATCCCAGATATCCAATCCCTTGCACAATTAAGGGAAAAGTATTGCATTCAGTGCCTTGAGTTACTTGGAGAATATGTAGAAGTTCTTGGCCCCGTGTTACATGAAAAGGGAGTAGATGTATGTCTTGCTCTTCTGCAGCAAAATTCCAAACATCGGGAGGCATCCAAGGTTGCTTTACTGTTGCCTGATGTCATGAAGCTGATATGTGCTTTGGCTGCTCATAGAAAATTTGCTGCACTATTTGTGGACCGTGGGGGAATGCAAAAGCTGCTAGCTGTCCCTAGAATGGCTCAAACTTACTTCGGCCTATCGTCTTGTCTATTTACCATTGGTTCCCTTCAGGGAATAATGGAAAGGGTTTGTGCTCTTCCGTCAGACGTCGTTTTTCATGTTGTTGAGTTGGCTCTCCAACTCCTGGAGTGCAACCAAGATCAAGCGCGCAAAAATGCGGCATTGTTTTTTGCCGCTGCATTTGTCTTCAGGGCAGTTCTTGATGCTTTTGATTCTCAAGATGGATTACAGAAATTACTGGGTCTTCTAAATGATGCTGCGTCGGTAAGGTCTGGAGTAAATTCTGGAGCCTTGGGCTTATCAAGTGCAGGATCTCTTCGGAATGATCGATCATCTGCAGAAGTGCTGACATCATCTGAGAAGCAGATTGCCTACCACACTTGTGTTGCTTTGCGACAATATTTCAGGGCACATCTCCTTTTATTAGTTGATTCAATTCGCCCAAACAAAAGTAACCGTAGTGCTGCTAGGAACATCCCAAGTGTAAGGGCCGCATACAAGCCACTTGATATCAGTAATGAGGCCATAGATGCAGTATTCCTACAATTACAAAAAGATCGGAAGCTTGGTCCTGCATTTGTAAGAACTCGCTGGCCAGCTGTGGAGAAATTCTTGGCTTATAGTGGCCATATTACTATGTTGGAATTGTGTCAGGCCCCACCTGTGGAACGATATCTGCATGATTTGCTCCAGTATGCATTGGGTGTTCTGCATATTGTGACTTTGGTACCTAGCAGTCGTAAGATGATTGTAAATGCAACACTAAGCAATAATCGTGTTGGTATAGCAGTGATTTTGGATGCTGCAAATATTGTTAGTAGTCATGTGGATCCGGAGATCATCCAGCCAGCATTAAATGTTTTGGTCAACCTCGTTTGCCCCCCACCTTCAATCAGCAATAAACCTGCTTTGGCTTCACAAAGTCAACAGTCTGCTTCTGCCCAGACCTCAAATGCTCCACCCTTGGAGAGTAGAGACAGGACTGCTGAACGTAATAACCCGGATCGAGTGGCTGCTGTTACCAATCAGATTGATCCTAGAGAAAGGAATGGGGAATCCAGTGCTGTAGATCGAACGACAACGATATCTAGTTCACAAACACTGAATAACACTCCACAAACTCCTGGTTCTGCAACAACCTCAGGATTAGTTGGCGACCGGAGAATCACTCTGGGTGCTGGAGCAGGTTGTGCTGGCCTAGCTGCACAACTAGAACAAGGATATCGTCAAGCAAGAGAAGCTGTTCGTTCTAATAATGGTATAAAGGTTCTTTTGCATCTCCTCCAACCTCGCATATATTCACCACCTGCTGCTCTAGATTGCCTTCGTGCTCTAGCATGTCGAGTCCTACTTGGATTAGCTAGAGATGATACAATTGCACACATATTGACGAAGCTTCAGGTTGGGAAAAAGCTTTCAGAGCTAATTCGCGATTCGGGCAGCCAGACAACTGGAACAGAGCAGGGCAGGTGGCAAGCTGAACTTTCCCAGGCTGCAATTGAGTTGATTGGGATTGTGACTAATTCAGGGCGTGCAAGTACATTAGCTGCTACTGATGCAGCTACTCCTACCTTGAGGCGGGAACTTTTGCTCCTAATTCATGAACACCTGCAGGCATCTGGATTGTCACAAGCTGCTTCTACGTTGCTTAAAGAGGCTCAATTGACTCCCTTACCATCGTTGGCTGCTCCATCTTCTCTTGCACAACAGCCAACCACACCAGAAGTTTCCTCAACATCAATTCAGTGGCCATCTGGCCGGGCCCCTTCTGGATTTCTCAGTAATAAATTAAAAGCTAATGGAAGGGATGAGGATGTCAGCTTGAAAATTGATTCTTTCTCTGCAAAGAAAAAATCATTGACCTTTTCATCATCTTTTGGTTCACATTCAAAACGTCACCTTGCTGATTCACAGCAGCCCCCATCCAGAAAATGGTTAAGTACTGGGAAGGAATCTTCAGATACTAGTATTCTAGAGATGGCATCTGAATCTTCAGGGAAACATAACATTGATACTGGATCTCACTGTAAGACTCCAATGAACATGCCAACAAAGCGCAAGCTTTCTGATTTAAAGGATATAGGAATGTTCTCATCATCTGCCAAGCGGTTAAATGTTGGGGACCAAGGACTTCGCTCTCCTATTTTTTCAAGTTCAATACGGAAAACTACTCAGCATGCTGATTTTGCCGGGCTTTCTACTCCAATTTCTAACCTAAGAAGTACAGCTGACAATGGGGATGAGAACCAATATAGTATTTCAAACCCAAGTCAGATGACGCCATCCTCCCAAGTGTTAAATGATCTTCAGCCCAACAACCCAGAACGAGTAACCCTTGATTCTCTAGTGGTTCAATATTTAAAGCATCAGCATCGCCAATGCCCAGCTCCTATTACGACTCTTCCTCCACTCTCTCTTCTTCATCCTCATGTTTGTCCCGAGCCAAAGCGAAGCTTAGACGCTCCTTCTAATGTGACTGCTCGGCTTGGTACACGTGAATTTAAACTTGCATATGGAGGAGTGCATGGGAATCGCAAGGATAGGCAATTTGTTTACAGCAGGTTTAGGCCATGGCGCACTTGTAGAGATGATGCTGGTGCCTTGTTAACATGCATTACCTTCCTTGAGGACTCTTCTCATATTGCTGTTGGGAGCCACAATGGGGAGCTAAAATTGTTCGACTCTAACAACAACAATGTGGTGGAGAGCTACACTGGTCACCAGTCTCCTTTGACGCTTGTTCAGTCTTTTGTTTCTGGTGAGACCCAGCTGTTGCTTTCATCAAGCTCCCAAGATGTTAGGCTGTGGGATGCAGCATCAATTTTGACTGGTCCTACCCATTCATTTGATGGGTGCAAGGCTGCCAGGTTTAGCAATTCTGGGAATGTCTTTGCAGCCTTGTCAACTGAATCTACACGGCGGGAAATCCTCCTGTATGATATCCAAACTTGTCAGCTAGAGTCGAAGTTGACAGATACATTTGCAACTTCTACTGGGCGTGGTCATGTGTATTCTTTAATCCACTTTAGCCCCTCTGACTCGATGCTGCTTTGGAATGGTGTCTTGTGGGATCGGCGGGTTTCTGGGCCTGTTCATCGTTTTGATCAGTTCACAGACTATGGAGGTGGAGGCTTTCATCCTGCTGGTAATGAGGTAATTATAAACTCAGAAGTCTGGGATCTGCGCAAGTTCAGGCTATTACGTAGTGTTCCTTCATTAGATCAAACATCAATAACATTCAATGCACGTGGTGATGTAATGTATGCAATCTTGAGGAGAAATCTTGAAGATGTGATGTCAGCAGTCCACACACGTCGTGTCAAGCATCCTCTTTTTGCTGCATTCCGAACAGTTGATGCAATTAATTATTCTGACATAGCTACTATACCTGTGGATCGCTGTGTCCTTGATTTTGCAACTGAGTCAACAGATTCGTTTGTTGGATTGATTACTATGGATGATCAAGATGAGATGTATGCATCAGCTAGAGTTTATGAAATTGGTCGCCGGAGACCAACTGATGATGATTCTGATCCTGATGATGCAGAAAGTGAGGAGGAAGATGAGGATGACGATGATGATGATGGTGATGTAGATCCACTATTAGGCCCTGGTTTCCGTGGTGAGAGCGATAGTGATCCTGATGACATGAGCAATGATGAAGATGATGATAGTATAAGTGAACTTGATGATGATGAAGATGGTGACTTTATGTTGGATGATGTCGAGTTCGACGGAGGACCTGGGATATTGGAGATTTTGACGGAGGGGGAAGAGGAGGATGATGAAGATAGTGAAGTACTCGAATCCTTAAGTAGCGATGAAGAGGATTATGTGGGTAATGGCTTTGGTTATTAA 5814 0.4505 MEDQANQNQSQGPPPPQPPPLPAPESEPPVEEEEEDEEDDSKKEEEELVAKVNRLMEKIISAPDNPKPAVLHALASILETQESRYMEENGYSSSSNARAAHNIGRLGSLIRENDEFFELISSKFLAESTYSTAVQAATCRLLLCCSLTWIYPHVFDEPVLDCIKEWVLDDNGRLSAEEQNLKHNSGRRDASDSEMLKTYSTGVLAVCLVSGGQVVEDVLTSGLSAKLMRYLRLRVLGETSSSQKEITHATDSRHASGNSSVRVRDDGRGRFRQLLEPCHLDDSRMVDDRSLDDVSLERGLDKSISGQEDSWVDGEPPDLLGKNADIREADADDEDRWHCTDISDGRMKYGEHDDNLRDDSSRRRTNRGWGRSKGKGRVNEGTVESEAIVSSPGSGSRLGQGRSVRDRTMQRNVDVRRVPDSKKNARTTSDASVLERGDNDDCFRDCRIGSRDISDIVRKAICAAEAEARSANAPDEAVKAAGDAAADLVKTTASEEFKSTNDEDAAVLAASRAASTVVDAASAVEVSRSSISINTETENVSGTEPEIVEDVEEYFIPDIQSLAQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKHREASKVALLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTYFGLSSCLFTIGSLQGIMERVCALPSDVVFHVVELALQLLECNQDQARKNAALFFAAAFVFRAVLDAFDSQDGLQKLLGLLNDAASVRSGVNSGALGLSSAGSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSNRSAARNIPSVRAAYKPLDISNEAIDAVFLQLQKDRKLGPAFVRTRWPAVEKFLAYSGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNATLSNNRVGIAVILDAANIVSSHVDPEIIQPALNVLVNLVCPPPSISNKPALASQSQQSASAQTSNAPPLESRDRTAERNNPDRVAAVTNQIDPRERNGESSAVDRTTTISSSQTLNNTPQTPGSATTSGLVGDRRITLGAGAGCAGLAAQLEQGYRQAREAVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTTGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRELLLLIHEHLQASGLSQAASTLLKEAQLTPLPSLAAPSSLAQQPTTPEVSSTSIQWPSGRAPSGFLSNKLKANGRDEDVSLKIDSFSAKKKSLTFSSSFGSHSKRHLADSQQPPSRKWLSTGKESSDTSILEMASESSGKHNIDTGSHCKTPMNMPTKRKLSDLKDIGMFSSSAKRLNVGDQGLRSPIFSSSIRKTTQHADFAGLSTPISNLRSTADNGDENQYSISNPSQMTPSSQVLNDLQPNNPERVTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLGTREFKLAYGGVHGNRKDRQFVYSRFRPWRTCRDDAGALLTCITFLEDSSHIAVGSHNGELKLFDSNNNNVVESYTGHQSPLTLVQSFVSGETQLLLSSSSQDVRLWDAASILTGPTHSFDGCKAARFSNSGNVFAALSTESTRREILLYDIQTCQLESKLTDTFATSTGRGHVYSLIHFSPSDSMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRCVLDFATESTDSFVGLITMDDQDEMYASARVYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDGDVDPLLGPGFRGESDSDPDDMSNDEDDDSISELDDDEDGDFMLDDVEFDGGPGILEILTEGEEEDDEDSEVLESLSSDEEDYVGNGFGY 1937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02439 1937 Gene3D - 1507 1831 IPR015943 GO:0005515
Adu08g02439 1937 MobiDBLite consensus disorder prediction 384 406 - -
Adu08g02439 1937 PANTHER VPRBP PROTEIN-RELATED 1268 1817 IPR033270 GO:0016567
Adu08g02439 1937 PANTHER VPRBP PROTEIN-RELATED 37 281 IPR033270 GO:0016567
Adu08g02439 1937 MobiDBLite consensus disorder prediction 953 1035 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 1830 1851 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 1906 1925 - -
Adu08g02439 1937 PANTHER VPRBP PROTEIN-RELATED 339 980 IPR033270 GO:0016567
Adu08g02439 1937 PANTHER VPRBP PROTEIN-RELATED 1002 1283 IPR033270 GO:0016567
Adu08g02439 1937 MobiDBLite consensus disorder prediction 1 46 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 1007 1035 - -
Adu08g02439 1937 PANTHER BNAA03G51310D PROTEIN 1268 1817 - -
Adu08g02439 1937 PANTHER BNAA03G51310D PROTEIN 1002 1283 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 242 257 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 1215 1248 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 1817 1937 - -
Adu08g02439 1937 SUPERFAMILY WD40 repeat-like 1507 1738 IPR036322 GO:0005515
Adu08g02439 1937 SUPERFAMILY ARM repeat 579 1134 IPR016024 -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 1275 1331 - -
Adu08g02439 1937 PANTHER BNAA03G51310D PROTEIN 339 980 - -
Adu08g02439 1937 PANTHER BNAA03G51310D PROTEIN 37 281 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 302 409 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 27 43 - -
Adu08g02439 1937 ProSiteProfiles LIS1 homology (LisH) motif profile. 1177 1209 IPR006594 GO:0005515
Adu08g02439 1937 MobiDBLite consensus disorder prediction 1275 1337 - -
Adu08g02439 1937 Coils Coil 31 51 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 320 366 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 953 975 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 1866 1893 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 11 26 - -
Adu08g02439 1937 SMART WD40_4 1549 1589 IPR001680 GO:0005515
Adu08g02439 1937 SMART WD40_4 1506 1546 IPR001680 GO:0005515
Adu08g02439 1937 SMART WD40_4 1594 1632 IPR001680 GO:0005515
Adu08g02439 1937 SMART Lish 1177 1209 IPR006594 GO:0005515
Adu08g02439 1937 MobiDBLite consensus disorder prediction 1215 1241 - -
Adu08g02439 1937 MobiDBLite consensus disorder prediction 242 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02439 Adu-Chr8 40107296 40115270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02439 1533 1739 U-box Gene Family AT2G33340 25.000 1.21e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02439 K11789 - gmx:100796030 2756.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02439 08 40107296 40115270 Adu08g02439 08 40107296 40115270 ECH