Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02434 ATGAAGAGGTCTCCTAATTCCTCTTCTTCATCTTCATCATCTTCTGTTGGTGTTGGTTTTGAATTAAAGATTAATAATAACGATAAGTATCCAAGAAGCAAAAATAGCAGTAATAATGTGAAGTTATCACAGAAAAAAGTATTGAAGAAAACAAATAGCTATGACAATAGCAGTGTCAACAAAAGAAGCTCCATTTACAGAGGAGTCACCAGGCATAGGTGGACAGGGAGGTTTGAAGCTCATCTGTGGGACAAGAATTCTTGGAATAATATTCAGAGTAAGAAGGGACGACAAGGGGCATACAATACAGAAGAAGCTGCTGCTCGCTCCTATGATCTTGCTGCTCTAAAGTATTGGGGACCTAATACAATCTTAAATTTTCCGATGGAAACATATGCCAAGGAAATTGAGGAAATGAAGGATGTTTCACAGACTGAATACTTGGCTTCTCTGCGAAGAAGGAGCAGTGGATTTTCAAGAGGTGTTTCCAAGTATCGTGGAGTGGCTAGTAGGCATCACCACAATGGAAGGTGGGAAGCACGAATTGGAAGAGTAAACGGCAACAAGTACCTTTATCTGGGGACCTATAACACTCAAGAAGAGGCGGCAGCAGCATATGATAGAGCAGCTATCGAGTACAGAGGAATAAATGCAGTAACAAATTTTGATATAAGCAATTATATTGACAAAATAAAGAAGAATGAGCCGTCTATGAAAGAAGCACAAACACATATAACTCCAATCTCTACTGAATCTAAAGAAGCACAAGTAGTGGAGCAGGAGGCTCCTTCCACAGTAGTGGCAGATCCAGCAAATTTAGAAAATATGCAGAAGAAAAAAGAGCAGCCAAACACAGATATCGATGGCATACTTTCTCGGGATCTGAGATGGAGCTTCATGGATGCCGAATTATCCGAGTTCAACATGAATGATATTTTTCAAGGTGAAGGTAGTGGGTTGGAGGATGACATCAACCTTATGTGTATGGCTGATCCTGATGAGAGTAGTTTCAATCTGAACACTATCTTTGATGATCCTGGAAAATGTGGTGGAGATATGCATGTCTATGCCAATTATTAA 1080 0.3981 MKRSPNSSSSSSSSSVGVGFELKINNNDKYPRSKNSSNNVKLSQKKVLKKTNSYDNSSVNKRSSIYRGVTRHRWTGRFEAHLWDKNSWNNIQSKKGRQGAYNTEEAAARSYDLAALKYWGPNTILNFPMETYAKEIEEMKDVSQTEYLASLRRRSSGFSRGVSKYRGVASRHHHNGRWEARIGRVNGNKYLYLGTYNTQEEAAAAYDRAAIEYRGINAVTNFDISNYIDKIKKNEPSMKEAQTHITPISTESKEAQVVEQEAPSTVVADPANLENMQKKKEQPNTDIDGILSRDLRWSFMDAELSEFNMNDIFQGEGSGLEDDINLMCMADPDESSFNLNTIFDDPGKCGGDMHVYANY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02434 359 SMART rav1_2 65 134 IPR001471 GO:0003700|GO:0006355
Adu08g02434 359 SMART rav1_2 164 229 IPR001471 GO:0003700|GO:0006355
Adu08g02434 359 CDD AP2 64 128 IPR001471 GO:0003700|GO:0006355
Adu08g02434 359 ProSiteProfiles AP2/ERF domain profile. 164 223 IPR001471 GO:0003700|GO:0006355
Adu08g02434 359 ProSiteProfiles AP2/ERF domain profile. 65 128 IPR001471 GO:0003700|GO:0006355
Adu08g02434 359 MobiDBLite consensus disorder prediction 29 56 - -
Adu08g02434 359 SUPERFAMILY DNA-binding domain 64 130 IPR016177 GO:0003677
Adu08g02434 359 CDD AP2 163 225 IPR001471 GO:0003700|GO:0006355
Adu08g02434 359 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Adu08g02434 359 PRINTS Ethylene responsive element binding protein signature 205 225 IPR001471 GO:0003700|GO:0006355
Adu08g02434 359 Pfam AP2 domain 65 120 IPR001471 GO:0003700|GO:0006355
Adu08g02434 359 Pfam AP2 domain 163 215 IPR001471 GO:0003700|GO:0006355
Adu08g02434 359 Gene3D AP2/ERF domain 163 225 IPR036955 GO:0003700|GO:0006355
Adu08g02434 359 Gene3D AP2/ERF domain 65 130 IPR036955 GO:0003700|GO:0006355
Adu08g02434 359 SUPERFAMILY DNA-binding domain 163 225 IPR016177 GO:0003677
Adu08g02434 359 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 292 - -
Adu08g02434 359 MobiDBLite consensus disorder prediction 25 56 - -
Adu08g02434 359 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02434 Adu-Chr8 40035133 40043743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02434 158 233 AP2-EREBP Transcription Factor Family AT5G57390 39.286 5.04e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Adu08g02434 AP2 6.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02434 - - adu:107463124 692.575