Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02391 ATGTCTCAAGGCTATTACTCAGAGTCATACCCTTCTTCTTCTTCTGATTCTGGATCTGATATTTCAGATGCTGCTGCTGCTTCAGCTGAACTGAAGCTCTATCGAGCATTCATTTTCTCAGCACCAATATTCTTCACTTTCATTCTTCTCTTCCTCTTTTATGTCTTCTATCTTCGACCCAGAAGGGTTGATTGGTCCTCCCTTAGGATGAGACCCTTTGCTTTTGCTCATGACTTCAACACCAACACCATCTCCACGTGGGATATTGGGTTGAAGAAAGAATTGAGAGAGATGCTGCCTATTATTGTGTATAAGGAAAGCTTCTCTGTCAAAGATACCCAATGCTCAGTGTGCCTTTTGGACTACCAAGCAGAGGATAAGCTTCAACAGATACCTGCATGTGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTGTCCAGCCACAGCACCTGCCCTCTCTGCCGCTTGTCCCTATTAGCATCGGCTAAATCTTCAACGGAGCCATCCCACACACAGGTTGATGGGCCACAGAGCAATGAGGAAACACAGACCATAGAATCATCAGAGTTGAGAGCTACTAGTCATGTAGAAACCACTGTTTCCCAGAATGTCTCAGGAGAGGTTGCAATTGCCGCTCACTGCATCGATGTTGAAGGACAACATGGACAAAACAATCAGTAG 687 0.4512 MSQGYYSESYPSSSSDSGSDISDAAAASAELKLYRAFIFSAPIFFTFILLFLFYVFYLRPRRVDWSSLRMRPFAFAHDFNTNTISTWDIGLKKELREMLPIIVYKESFSVKDTQCSVCLLDYQAEDKLQQIPACGHTFHMSCIDLWLSSHSTCPLCRLSLLASAKSSTEPSHTQVDGPQSNEETQTIESSELRATSHVETTVSQNVSGEVAIAAHCIDVEGQHGQNNQ 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02391 228 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Adu08g02391 228 MobiDBLite consensus disorder prediction 167 196 - -
Adu08g02391 228 SUPERFAMILY RING/U-box 99 162 - -
Adu08g02391 228 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 6 188 - -
Adu08g02391 228 CDD RING-H2_EL5_like 114 157 - -
Adu08g02391 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 162 IPR013083 -
Adu08g02391 228 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 6 188 - -
Adu08g02391 228 Pfam Ring finger domain 114 157 IPR001841 -
Adu08g02391 228 SMART ring_2 115 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02391 Adu-Chr8 39580232 39583112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02391 25 190 C3H Transcription Factor Family AT4G10150 59.763 5.72e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02391 K19039 - gmx:100794211 257.684