Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02344 ATGGAATCTTGTGACAAGATGAATGGAGGAACTGCGGATATTGTTTCTGGTGGTGGTAACAAGAAAGGGAGTGATAATGGCATCTGCTGCAACTGCCAAAAGAGTCAATGCTTGAAACTTTATTGTGAATGTCTTCGTGCTGGAAATTTGTGCAACAATTCTTGTACTTGCAAAGCCTGCGAGAATAATGAGAATAACAGGGATAAAGTGTATGAGAAGAAAAAAGAAATAGAATTACGTGATCCAGAGGCGTTTCAATCCAAGATTATTATTGGTGGGAACGAAGCAGCAAGGCACAGAAAAGGATGCAACTGCAGGAAATCAAAGTGCAAGAACAAGCACTGCGCTTGCTTCAGTGCTGGAGTTGGTTGCTCTAATCAGTGTAAATGTGACGATTGCATGAATGAGTATGGAATCGTCAACAACCAACAAGTACTTGTTTTGACTAATGATAGTAATAATAATGGCAGCAACAACATCACGGTGGATAATGGATCATCTCAATTTCAACATCTATTTGCCGATAACGATGGCTGCTTACAGAATATGCAGAATTCTGAATCAGATATGGATAGAATTTTTAATGAGATAGAGCAGGCAGATTATTATTATTATGGTCAGCAAACGTCACTGAGCAGCAACAGCGAGAATGGAATCAACAATAACAACGTGAATTTGCCATCAAATCAGCAAGATAGCCATGTTCCTGCTGCTGCTGTTTGTTATAACTATAATCTTTATGGAAACATTATTCAAAACAATGTTGCTGCACCTAATTATCATCAGCATCTTACTACCCCAAGGCAGATTTCTCCAGTCGAATACAACAACACTATTGATGATCTTGATTTGGAGGGACCACCATCATCTTGGTTCTATGGTGAGCCCTCTTCCCTTCCTAGCTTCTTCACGACGGACACAACAATTCAGGATAGTAATCAGCAGTATAAACCTGAGACTCTGAATTATGATGATATTTTTCAACAAGAAGCACTACCAATATCACCGACAATGAATCAGAGTGCACAGCATCTGACAAACACGCAACCACCTAGTCATCCTAATAATAACCAACTTCCATAA 1083 0.3934 MESCDKMNGGTADIVSGGGNKKGSDNGICCNCQKSQCLKLYCECLRAGNLCNNSCTCKACENNENNRDKVYEKKKEIELRDPEAFQSKIIIGGNEAARHRKGCNCRKSKCKNKHCACFSAGVGCSNQCKCDDCMNEYGIVNNQQVLVLTNDSNNNGSNNITVDNGSSQFQHLFADNDGCLQNMQNSESDMDRIFNEIEQADYYYYGQQTSLSSNSENGINNNNVNLPSNQQDSHVPAAAVCYNYNLYGNIIQNNVAAPNYHQHLTTPRQISPVEYNNTIDDLDLEGPPSSWFYGEPSSLPSFFTTDTTIQDSNQQYKPETLNYDDIFQQEALPISPTMNQSAQHLTNTQPPSHPNNNQLP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02344 360 SMART CXC_2 25 66 IPR033467 -
Adu08g02344 360 SMART CXC_2 98 139 IPR033467 -
Adu08g02344 360 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 29 334 - -
Adu08g02344 360 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 29 64 IPR005172 -
Adu08g02344 360 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 101 136 IPR005172 -
Adu08g02344 360 MobiDBLite consensus disorder prediction 339 360 - -
Adu08g02344 360 Coils Coil 60 80 - -
Adu08g02344 360 ProSiteProfiles CRC domain profile. 26 138 IPR005172 -
Adu08g02344 360 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 29 334 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02344 Adu-Chr8 38953190 38954375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02344 30 143 CPP Transcription Factor Family AT3G04850 43.307 2.47e-29 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Adu08g02344 TCR 7.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02344 - K21776 ahf:112771246 600.897