Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02341 ATGCGTGTCTGCCGCGGTGATCAGCGGCACTGTGTTCGCGAAAAAAGGGCGTTGCCTGAACACGATGGTGGTCGACGGTGCTGTTTTCGGAAAGGAATGGGGCTGCGTGCAGCGTTGGGTGTAGCGGCCCTGACCAATTTCATGCTCTCACCAGGAGAAGAAGAGAACCATAGTGAAATCCAAGAGAGTAATAATGATGAACACCAGAGTCTTGCCATCACCAACTACACCGGAGAGGCAAGAGATGATTTGAGTGCATCAATTAATCGCTTCGTGGAGACTCTAAATTACTTCAACTTGCGCAATTTGGGGTACCCTAGTAATCAAGAGTTGAAGTATGATGGATTGGGAGCATTGCTTAATTATCACATAAACAATGCAGGAGATCCATTTAAAGGGAGCAGCTTTGGTCTAAACTCATCGGAATTCGAAGTGTGCGTGCTTGATTGGTTTGCAAAGTTATGGGACATACACAAGGGTCACTACTGGGGATACGTCACTACCGGTGGGACTGAAGGAAATCTTCATGGCATTTTAATAGGGAGAGAGCAACTTCCAGATGGAATTCTATATACTTCACAGGATTCACATTATTCAATATTCAAAATAGCAAGAATGTATCGAATGCAATGCGTGAAGGTTGCCACTTTAATCTCTGGTCAGATTGATTGCAATCATTTAAAGGCTTTACTACTTGCTCACAGGAATAAGCCAGCCATTATCAATCTTAACATAGGGACAACTATGAAAGGAGGAGTTGACGACCTTGATCTTGTAATACAGACACTTGAAGAATGTGGTTTCACTTCTGATCGATTCTATATTCACTGCGATGCAGCATTGTTTGGAGTGATGCTGCCTTTTCTCAAGAGAGCACCAAAGATTACCTTCCAGAAATCCATTGGAAGTGTAACTATTTCTGGCCATAAGTTCTTGGGATGTCCAATTCCATGTGGTGTTGTAATAACTCGTTTGAAATACATCAATAATGCCCTATCCAAGGATGTTGAAATCATTGGTTCAAGGGATGCTACAATAACAGGTAGCCGTTGTGGACATACCCCTATCTTCCTTTGGTATCGTCTCAAAAGCAAAGGATTAAAAGGGCTCAAGAAAGACGTTGAGAAGTGCATAATGAATGCAAGTTACTTACATGGTCGATTGCGTGGTGCTGGCATTGGTGCAATGTTGAATGAGTTTAGTAACATCGTTGTGTTTGAGAGGCCTCAATTAAATGATGATAATGATGACTTTACTCGTCGGTGGAGTTTGGCGTGCCAAGGGAAAATTGCGCACGTTGTTGTCATGCAGCACGTGACCACTAAAATGCTTGACTCTTTTGTTAGTGAGTTTCTTCAGAAAAGGTTTCAGGCTCAGTGCATTGCAGACCATGTTGGTTCCTCAAATTGTTCTTGTTCCATGCATGATGGTTTTCTTCATTGA 1443 0.4269 MRVCRGDQRHCVREKRALPEHDGGRRCCFRKGMGLRAALGVAALTNFMLSPGEEENHSEIQESNNDEHQSLAITNYTGEARDDLSASINRFVETLNYFNLRNLGYPSNQELKYDGLGALLNYHINNAGDPFKGSSFGLNSSEFEVCVLDWFAKLWDIHKGHYWGYVTTGGTEGNLHGILIGREQLPDGILYTSQDSHYSIFKIARMYRMQCVKVATLISGQIDCNHLKALLLAHRNKPAIINLNIGTTMKGGVDDLDLVIQTLEECGFTSDRFYIHCDAALFGVMLPFLKRAPKITFQKSIGSVTISGHKFLGCPIPCGVVITRLKYINNALSKDVEIIGSRDATITGSRCGHTPIFLWYRLKSKGLKGLKKDVEKCIMNASYLHGRLRGAGIGAMLNEFSNIVVFERPQLNDDNDDFTRRWSLACQGKIAHVVVMQHVTTKMLDSFVSEFLQKRFQAQCIADHVGSSNCSCSMHDGFLH 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02341 480 Gene3D Aspartate Aminotransferase, domain 1 363 455 IPR015422 GO:0003824
Adu08g02341 480 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 303 324 IPR021115 GO:0016831
Adu08g02341 480 PANTHER SERINE DECARBOXYLASE 53 475 - -
Adu08g02341 480 Pfam Pyridoxal-dependent decarboxylase conserved domain 141 391 IPR002129 GO:0016830|GO:0019752|GO:0030170
Adu08g02341 480 PANTHER - 53 475 - -
Adu08g02341 480 SUPERFAMILY PLP-dependent transferases 108 451 IPR015424 -
Adu08g02341 480 Gene3D - 119 362 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02341 Adu-Chr8 38914489 38922172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02341 202 384 Calmodulin-binding Proteins AT1G65960 26.702 6.73e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02341 K25193 - gmx:100781665 628.632