Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02298 ATGAGGAAGAAGCTCGATACCCGATTCCCTGCGGCTCGGATAAAGAAGATAATGCAAGCAGATGAAGATGTTGGAAAGATAGCACTTGCAGTTCCTGTTTTAGTCTCTAAAGCTTTGGAGCTATTTTTGCAAGATCTATGTGACCGCACGTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAACTCATTGCATTTAAAACATTGCGTACAAAGCTACAATGTCTTTGATTTTCTGAGGGATGTTGTCAGTAGGGTTCCTGACTACGGCCATGGCCATGGCCATACAGAAGCTGGATCCGATGATCGGGTCATTTATAAAAGAAGGAAGGCTGCTACTGATGATTGTAACGACAGTGATGAAGAGGCTAAGAGGAGCAAAATGCATGAGTTGGGCCACACTGGTAGTACTGGAAGGGGAAGGGGCCGAGGTAGAGGAAGAGGCCGTGGCCGAGGAGCTAGAACTGCAGAAAGAGAGGCATATCGTCCGGAACCTGAAATTGAGCCTCGTGCTTCTATTCCGGAGAGCAGTCAACATAATAGTAGCACAACTGCGGCAATATTTGATGGTTCACAGTCTGAGGACTTACCAAAGGAGAATATTGCTGCCGTCGCTACTGAAAGCTCCGAGGCACTCCCAAATGCTGTTCCCAGTTCTGACACAAACCAAAACCTGGACAAAAACGATAGCACAGCAGCAGCAATTGGTGCCTCATTACCTGAATCTGAAAAAGAGAGCAAGCACGAGGAAATTCCAGGCTGGTCCCTTTCTGATGTGGACAAGATGGCCATCGACTCAATGCAGCTTGTGCAGCTCGGTGGTCAACTAGAAGTTGATGAAGAAGATTATGATGAGGAAGGGTAA 867 0.4671 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHTEAGSDDRVIYKRRKAATDDCNDSDEEAKRSKMHELGHTGSTGRGRGRGRGRGRGRGARTAEREAYRPEPEIEPRASIPESSQHNSSTTAAIFDGSQSEDLPKENIAAVATESSEALPNAVPSSDTNQNLDKNDSTAAAIGASLPESEKESKHEEIPGWSLSDVDKMAIDSMQLVQLGGQLEVDEEDYDEEG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02298 288 MobiDBLite consensus disorder prediction 113 255 - -
Adu08g02298 288 MobiDBLite consensus disorder prediction 174 191 - -
Adu08g02298 288 MobiDBLite consensus disorder prediction 151 170 - -
Adu08g02298 288 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Adu08g02298 288 PANTHER HISTONE SUPERFAMILY PROTEIN 1 287 - -
Adu08g02298 288 MobiDBLite consensus disorder prediction 212 232 - -
Adu08g02298 288 MobiDBLite consensus disorder prediction 113 137 - -
Adu08g02298 288 SUPERFAMILY Histone-fold 4 97 IPR009072 GO:0046982
Adu08g02298 288 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Adu08g02298 288 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02298 Adu-Chr8 38199945 38203418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02298 1 277 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.704 1.94e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Adu08g02298 CBFD_NFYB_HMF 2.1e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02298 K21752 - gmx:100814712 387.111