Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02263 ATGGGTTCTTCAGTTGGAGGAAGCAACAGCAACAACGCAGGCGTGGAGTGGCACGTGCGCCCTTCAAACCCTAAGAACCCCATCGTTTTTTTCGATGTCACCATCGGTAACATACCTGCTGGCAGGATCAAGATGGAGCTCTTCGCTGATATTGCCCCCAAAACCGCTGAGAATTTCAGGCAGTTCTGCACTGGGGAGTACAGGAAAGCAGGACTACCTGTCGGCTACAAGGGTAGTCAATTTCATAGAGTTATTAAGGATTTTATGATTCAGGCTGGTGATTTCGTTAAGGGTGATGGCAGTGGATGTGTCTCTATCTATGGACACAAGTTTGATGATGAAAATTTTATTGCCAAACATACTGGCCCTGGTCTTCTTTCAATGGCAAACAGTGGAGCTAACACCAATGGTTGTCAGTTCTTCATAACTTGTTCAAAATGTGACTGGCTTGACAACAAGCATGTGGTTTTTGGGAGAGTGCTTGGAGATGGTCTTTTGGTTGTCCGGAAGATCGAGAATGTCGCAACTGGACCCAATAACCGGCCGAAATTAGCTTGTGTCATTGCTGAATGTGGTGAAATGTAA 585 0.4581 MGSSVGGSNSNNAGVEWHVRPSNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPVGYKGSQFHRVIKDFMIQAGDFVKGDGSGCVSIYGHKFDDENFIAKHTGPGLLSMANSGANTNGCQFFITCSKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02263 194 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 192 IPR002130 GO:0000413|GO:0003755
Adu08g02263 194 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 20 194 - -
Adu08g02263 194 PIRSF Peptidylpro_ismrse 14 194 IPR024936 GO:0003755
Adu08g02263 194 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 30 193 IPR002130 GO:0000413|GO:0003755
Adu08g02263 194 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H 20 194 - -
Adu08g02263 194 SUPERFAMILY Cyclophilin-like 17 194 IPR029000 -
Adu08g02263 194 Gene3D - 16 194 IPR029000 -
Adu08g02263 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Adu08g02263 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 81 93 IPR002130 GO:0000413|GO:0003755
Adu08g02263 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 IPR002130 GO:0000413|GO:0003755
Adu08g02263 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 IPR002130 GO:0000413|GO:0003755
Adu08g02263 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 167 IPR002130 GO:0000413|GO:0003755
Adu08g02263 194 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 76 93 IPR020892 GO:0003755|GO:0006457
Adu08g02263 194 CDD cyclophilin_ABH_like 27 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02263 Adu-Chr8 37701225 37707790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02263 23 191 U-box Gene Family AT5G67530 42.105 1.01e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02263 K09567 - gmx:100305521 376.711