Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02258 ATGGCTTTTTCCAATCTTGGCTTCCTCTTTATCCTTATCATCTTTGTCCATGTTGATGCAGATGACTTTCACTGGTCAGGGTCCTATTGCTCATCACTTAACAAAACTACCCCTAACAGTCCTTTCCGGTTGAACCTAAAGACCCTTTTCAAGTACCTATCTTCCAATGCCACCACGGGCAACAAGGAATTTTACAGCACCAAAGTCCTTGGCACAAACCACTTTGATACAATATATGGACTCTACTTGTGCAGGGGTGACCTCCCTTCTCAACTTTGTGGAAAGTGCATCTCAGAAGCAACCCATAGCTACTTGTTCCCAGACCCAAACCAAGGAATATTCGATTGCTCCTGGTCCATAGAGGGAGGAATTTCGTATGACGAGTGCATGGTTCAATATTCCAATAACTTCACTTACTTCTCGGCAGTCGACTTAACGCCTTCTAGTAGTTCTTGCTTGTCAAGCAATATGTCTGCAACCTTCATGAATTTAGTGTTTGACACTCTGAACAAAATTGCAGATAAAGCATCTCAAGGTTCTACAGAGAAGTATGCTACAAAACAAGTAAGAATATCTGGATTTCGGTCCCTATACTCTTTGGCTCAGTGTACACCAAACCTGTCATCTCAAGATTGTAGAACCTGTTTAGGCAACATGATAAAACAAGTTAAACAAGAGTGCGGTGGAAACGAAGCAACAAGTTCCAGCCGCAGCTGCAACTTGAAGTATGCTATGTACCCTTTCTATCGTGAAAGTAAAAGCCTGGCACCAGTAGGACTCATTCCTATAACAAATCTGTCAAATGATTTTGGCTATCTTTCCCACAACTGTTCAACTTCAACCAATGAAACCATCATCAAGAACAGTCAATTTAAATCTAACCTCAGGAACCTCCTCTCTTCCTTGTCTTCTAATGCCACCAACAAAATTGGCTTCTACAAGACCACCATTGGTGGCGGAGAAAGCCCCTCTGACACGGTTACCGGTCTCTTCATGTGCCGTGGCGATGTGTCCCTTAGTCTCTGTCAACTATGTGTCCAAAACGCTGCTAAACGAATACATTCAGAGTGTAGTTCGTCCAAGGAAGCCATCATTTGGTACACTCATTGCCTTCTTCGCTACTCCTATCGGTCTCCCCTCTCCACCTGGAACGACACGAGTCCCATGTTTCATGAGTTCAACATTGCCAACACCTCCAACCTTAACCGAGAGCAACAGAACTCCTTCACTCTCACATTAGTGAGCACTTTATCAGACATAACGAATATGAAGGAGGAGAGCACCACCAAGAATTATGTAACTGCAACCGCAAAACTGAATGGTGTCCAAACTCTATATGCTCTCGGCCAATGTACACCAGATCTAAATAGTGGAGATTGCAGGTCTTGCTTACGGAACATTTTCCTATATGAAATTCCATGGTGTTGTTTGTCAAGTCCAGAGGGAAAAGTTTTTTATCCTAGCTGCTATATCATGTTTGGATTGTCCAAATTTCATGGAGATGATGATCGAGTCGAGACACCTAGTCAGGCTAGTCTTCCTCCAGGAGCTACAGGAGGAAAGAGAAATGGTAGGTATGAGAAAAAAATTCTGTTGATTGTTGTTCCCACTATTGTTGCTGGGATGCTCTTCTTATGTTCTGGCTGGCATTTGTTAAGAAGAAAAGAAAGCAAGAGATACAAAACTATTCTCAGAGAAAATATTTTTGGTGATGAAGGTAGTACTTTGGAGCCATTGCAAATGGATTTGGCTATAATTGAGGCAGCAACAAATAACTTTTCAACTGAGAATTTGATTGGGAAAGGTGGATTTGGAAATGTTTATAAGGGTATTCTTTCTGATGGGAGACATGTAGCTGTAAAAAGATTATCAAAAATTTCTAAACAAGGCATTAAGGAGTTCAAGAATGAGGTGTTGTTGATAGCTAAATTTCAACATCGGAATCTTGTAACATTCATAGGTTTCTGCTTGAAAGATCAAGAGAAGATACTGATATATGAATATGTACCAAATGGAAGCCTTGATTACTTTTTATTTGATACTCAGCAACAAAAGTTGTTAAATTGGTCTCAGCGTTATAAAATTATAAAAGGAGTTGCACGAGGAATTCATTATTTACATGAGCATTCTCGACCCAAAATTATTCATCGTGATCTTAAACCAAGTAATGTCCTGTTAGATACAAGTATGAATCCAAAAATTTCGGACTTTGGCATAGCTAGAATTGTGGAAATGGACCGAGACCAAGAAATTACAAACAAAATTGTTGGGACATTTGGTTATATGTCTCCGGAATATGCAATGCTTGGATATTTTTCCGAAAAATCAGATATTTTCAGTTTTGGAGTTATGATTCTAGAAATTATTACTGGGAAAAAGATTTTAACTTCTTATGATTGTTATCATCTTGCTTCAGGCCTACTAAATTATGTTTGGGAAAAGTGGACAGAAAACAAAGCATTAAGCATTTTGGACCAAAAAATAAAAGAAAATTATCTTGAAATTGAAGTTATTAAGTGTATTCAAGTTGGATTGTTATGTGTTCAAGAAAATCCAGATGTTAGACCTCCAATGATAACAATTATTTCATATCTTGATAACCACTTAATTGAAATGCCATCTCCACAGGAGCCAGCATTTATGTTACATAGAAGAATAATTGATCAAGTACAAGTAGTTGATCATATCAACAATTTTACGCCATCCTCTATCAATGAGATGTCTATAAGTGAAGATCTTTCTAGATAG 2748 0.3872 MAFSNLGFLFILIIFVHVDADDFHWSGSYCSSLNKTTPNSPFRLNLKTLFKYLSSNATTGNKEFYSTKVLGTNHFDTIYGLYLCRGDLPSQLCGKCISEATHSYLFPDPNQGIFDCSWSIEGGISYDECMVQYSNNFTYFSAVDLTPSSSSCLSSNMSATFMNLVFDTLNKIADKASQGSTEKYATKQVRISGFRSLYSLAQCTPNLSSQDCRTCLGNMIKQVKQECGGNEATSSSRSCNLKYAMYPFYRESKSLAPVGLIPITNLSNDFGYLSHNCSTSTNETIIKNSQFKSNLRNLLSSLSSNATNKIGFYKTTIGGGESPSDTVTGLFMCRGDVSLSLCQLCVQNAAKRIHSECSSSKEAIIWYTHCLLRYSYRSPLSTWNDTSPMFHEFNIANTSNLNREQQNSFTLTLVSTLSDITNMKEESTTKNYVTATAKLNGVQTLYALGQCTPDLNSGDCRSCLRNIFLYEIPWCCLSSPEGKVFYPSCYIMFGLSKFHGDDDRVETPSQASLPPGATGGKRNGRYEKKILLIVVPTIVAGMLFLCSGWHLLRRKESKRYKTILRENIFGDEGSTLEPLQMDLAIIEAATNNFSTENLIGKGGFGNVYKGILSDGRHVAVKRLSKISKQGIKEFKNEVLLIAKFQHRNLVTFIGFCLKDQEKILIYEYVPNGSLDYFLFDTQQQKLLNWSQRYKIIKGVARGIHYLHEHSRPKIIHRDLKPSNVLLDTSMNPKISDFGIARIVEMDRDQEITNKIVGTFGYMSPEYAMLGYFSEKSDIFSFGVMILEIITGKKILTSYDCYHLASGLLNYVWEKWTENKALSILDQKIKENYLEIEVIKCIQVGLLCVQENPDVRPPMITIISYLDNHLIEMPSPQEPAFMLHRRIIDQVQVVDHINNFTPSSINEMSISEDLSR 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02258 915 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 16 258 - -
Adu08g02258 915 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 521 898 - -
Adu08g02258 915 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 266 503 - -
Adu08g02258 915 ProSiteProfiles Gnk2-homologous domain profile. 391 498 IPR002902 -
Adu08g02258 915 ProSiteProfiles Protein kinase domain profile. 593 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02258 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Adu08g02258 915 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 258 - -
Adu08g02258 915 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 521 898 - -
Adu08g02258 915 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 266 503 - -
Adu08g02258 915 CDD STKc_IRAK 599 867 - -
Adu08g02258 915 ProSiteProfiles Gnk2-homologous domain profile. 273 379 IPR002902 -
Adu08g02258 915 Gene3D - 147 248 IPR038408 -
Adu08g02258 915 Gene3D - 24 137 IPR038408 -
Adu08g02258 915 Gene3D - 391 498 IPR038408 -
Adu08g02258 915 Gene3D - 270 378 IPR038408 -
Adu08g02258 915 Gene3D Transferase(Phosphotransferase) domain 1 669 876 - -
Adu08g02258 915 Pfam Protein kinase domain 594 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02258 915 SMART serkin_6 593 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02258 915 SUPERFAMILY Protein kinase-like (PK-like) 577 900 IPR011009 -
Adu08g02258 915 Pfam Salt stress response/antifungal 30 135 IPR002902 -
Adu08g02258 915 Pfam Salt stress response/antifungal 277 375 IPR002902 -
Adu08g02258 915 Pfam Salt stress response/antifungal 402 493 IPR002902 -
Adu08g02258 915 Pfam Salt stress response/antifungal 157 244 IPR002902 -
Adu08g02258 915 ProSiteProfiles Gnk2-homologous domain profile. 142 248 IPR002902 -
Adu08g02258 915 ProSiteProfiles Gnk2-homologous domain profile. 24 138 IPR002902 -
Adu08g02258 915 ProSitePatterns Protein kinases ATP-binding region signature. 599 621 IPR017441 GO:0005524
Adu08g02258 915 Gene3D Phosphorylase Kinase; domain 1 555 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02258 Adu-Chr8 37661609 37666276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02258 249 883 Receptor kinase-like Gene Family AT4G05200 42.457 2.51e-168 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g02258 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02258 - - gmx:100785282 946.421