Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02236 ATGAACATGTTAGGCCTCAGAGACCTAGTTTTCATAGCACCAACCCATTCCCTTCACCATCATCACCAACAAGGCCAAACCATAATCTCACAAGACCACCACCATAGCCATGGCCATACCAACAACAACAACAACGACAATAACAATAACAATAACAATAACCTTCCTTTTCCTCCATCATCACTCAGCGTTGGCCTTGGAATCTTCCCCCTCATAACCGCCACACCCTGCATGCCACAAGATAACAATAACAACGTTCACCATGACCAACAACACCTTCTTGTTGGGACCAACACCACCACCACCACCACCGCCAATAACAGTTACTGGAACCTCAAGATGTGTCCTGAAGTTTCAGAACACGACGGCGGCGGTGGCGATGGAAACAACAACGGAGACGGTGGTGGTGGTAGTATCTACGGCCCTGAATTCAGGGTGTGCCAGGATTGTGGCAACAGGGCAAAGAAAGATTGCAGTTACAAGAGGTGCAGGACTTGTTGCAAGGGGCGTGGATATGATTGCAGCACTCACGTGAAGAGCACGTGGGTCCCCGTGTCGCATCGCCGGGCACGTGATATGGCCGTTGTTGCTGCCAGTGATGGTGGTGGTGCTGCTGCTCTTGGGGCTAATAAGAGGCTTAGAGCTTTTGGGTCATCACAAACAACTACAACTACTAATACCTCTCATAGTTCAACTTCTAATGCTACCACAACTAAGAGTTTGGATTCTACCTCTTGTCACCAGGATGCTGAATTTAAACAATCTTTACCGAGCCACGTTCGAGCCCCGGCGGCGTTTAGGTGCCACAGAGTGTCTGCTATTGGCAATGGCGAAGATGAAATTACATACTTGGCCACTGTCCACATTTGTGGCCATGTGTTCAAAGGGTTTCTTTATGATCAAGGTGCTGATGGCAAGAATGATGAAGTTCCTTGTGTTTCAGTGTTGCAACTTGGAAACAGTGGGAAGAACAACAACAATGGGGAATGTTCCTCTCCAACTCCAATTGGGGTTCCAATCAGTGCCTACCCTGCTTCTGCTTGCTGA 1047 0.4842 MNMLGLRDLVFIAPTHSLHHHHQQGQTIISQDHHHSHGHTNNNNNDNNNNNNNNLPFPPSSLSVGLGIFPLITATPCMPQDNNNNVHHDQQHLLVGTNTTTTTTANNSYWNLKMCPEVSEHDGGGGDGNNNGDGGGGSIYGPEFRVCQDCGNRAKKDCSYKRCRTCCKGRGYDCSTHVKSTWVPVSHRRARDMAVVAASDGGGAAALGANKRLRAFGSSQTTTTTNTSHSSTSNATTTKSLDSTSCHQDAEFKQSLPSHVRAPAAFRCHRVSAIGNGEDEITYLATVHICGHVFKGFLYDQGADGKNDEVPCVSVLQLGNSGKNNNNGECSSPTPIGVPISAYPASAC 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02236 348 Pfam Domain of unknown function (DUF702) 146 304 - -
Adu08g02236 348 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 348 IPR007818 GO:0003700|GO:0006355
Adu08g02236 348 MobiDBLite consensus disorder prediction 17 58 - -
Adu08g02236 348 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 256 302 IPR006511 -
Adu08g02236 348 MobiDBLite consensus disorder prediction 26 40 - -
Adu08g02236 348 MobiDBLite consensus disorder prediction 218 240 - -
Adu08g02236 348 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 348 - -
Adu08g02236 348 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 146 188 IPR006510 -
Adu08g02236 348 MobiDBLite consensus disorder prediction 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02236 Adu-Chr8 37382506 37387733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02236 1 333 C2H2 Transcription Factor Family AT5G12330 35.411 2.08e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Adu08g02236 DUF702 2.2e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02236 - - adu:107462849 617.076