Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02223 ATGGGTATGTCTGCTGCGGCACAGTTCCATGTTTTGGCTGTTGATGACAGCCTAATTGATAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCATTTCATGTTACAACAGTGGACTCTGCCATTAAGGCTTTACAATACCTTGGTATGGTTGAAGATAAACTAAAGGGTTATGAGACACCTGAAATTCATCAGAATGCAGAAGTTAATGTAAATCTGATCATAACAGATTACTGTATGCCAGAAATGACTGGCCATGATTTGCTAAGAAAAATTAAGGAATCAAATTCTCTTAAAGACATACCAGTTGTGATCATGTCCTCGGAGAATGTTCCATCAAGGATCAATAGATGCTTGGAAGATGGGGCTGAAGAATTCTTTCTGAAACCAGTTCAACAATCAGATGTGAACAAGCTGAAACCCCATTTATTGAAATCAAGATCCAAGGAAGAAGAGGAAACCCAACCCATCAACAATAACAAGAGGAAACAAGAATCAAGAATGGCCACCATCCATATAACACTGTGTATTAATCATAGAGGACGGTTTGAGAGAGGGTCTGGTGGGACAATTAGTTATACTGGTGGTGAAGTCGCAGAAATCAATAGGGTGAACGTTGATACACTGAACGGTTTTTTTATAACTGATTTGTTGAAGGACATTGGATATACGTCCGTTTCTAATTTTTACTGGCAAGAACCGGGGAAGGAGCTTGATGATGGGTTGAGGGACCTAAGGGTTGATATGGATGTAGTTAGAATATATGAGGCAGCCGTGAAGAATGGAAACAAAATCAATGTGTATACAGAGCATCCGATGGACCAGGCTGTGATTGTTGAGGAGAACAATATGACTCCGTCAAAGAGGAGAGTAAAGACATGTGTCAAAAGGACGCCAACACCAAAGAAGAATCCAAAGAGAAGATTGGTAGTAGTGGAAGATCATGATGATGCTGAAATTGTAGGTAATGTGCAAGTTGTGAAAGAGGACCAAAGAAGGGGTGAGGCCCAGAACATGGTAGAGGCCCATGAAGAAAATAAACAGGCTGAAGTTGTGGCCCAAAAAGAGGACAGTCACAATCAGCCACCATCAAGTCAGTCACAACCCTCCCAGCAGCCTGAAGCCAATGTTTCTGAACCTGTTGAACCTGAACAACTTACCCAATACACCCCACAGCCGTGCAGGAATCCACTTTCCCAATCGATCCCTGATTCAGGCCGATCCTCTGACTCCAATAGGATCCCCCAAACTAATCAAAGCAATCCTTCATTTGAGGTTGATGGAGGGCAAAAGGGGAACAAGAGGAGATCAACCAGGAGGCCTCCCCCTACAGGGCAATCCTTTATCCCGAACCTTGATCCGGAGAAGCCACCAACCTTTTATGTACCAGTTGAGGAGGATGAATTTTCTGATGAAAACCCTGGACATCATTGCTATTCTTCAGAGGACTTGCATAGCATAGCAAGTGACGATGATACTGAGACTCCAATTTTTCCTCAGAGCAATGCTGATGCCCCGGTTAGCCAGGTGAGGTTGGAATTGGGGATGGAGTTTGAGACTCTCAACCAGTTCAGAAAGGCTGTCCGAAAGTTTAATATCCACATTGGCAGGAGCATATTCTTTGCTCGTTGTGACTCAACAAGATCCAAGGCTATATGCTACgatgaggactgtccttggcaaatctactgtgccaagagaacgttttccgcaagctatcagTTGGATTTCCCGTCGAGCATCTTTCCCTTCATCCTCTTCGAACTTGATGAACTGCTGCAAGTTCCATCACTTGCAGGAGAGTTATATCTTCGCAACGACATGCTAGGGCTCACGAGAAAATTCCTTCTCTCCTTATGTGCACTTGAAACTGGATGA 1878 0.4207 MGMSAAAQFHVLAVDDSLIDRMLIERLLKTSSFHVTTVDSAIKALQYLGMVEDKLKGYETPEIHQNAEVNVNLIITDYCMPEMTGHDLLRKIKESNSLKDIPVVIMSSENVPSRINRCLEDGAEEFFLKPVQQSDVNKLKPHLLKSRSKEEEETQPINNNKRKQESRMATIHITLCINHRGRFERGSGGTISYTGGEVAEINRVNVDTLNGFFITDLLKDIGYTSVSNFYWQEPGKELDDGLRDLRVDMDVVRIYEAAVKNGNKINVYTEHPMDQAVIVEENNMTPSKRRVKTCVKRTPTPKKNPKRRLVVVEDHDDAEIVGNVQVVKEDQRRGEAQNMVEAHEENKQAEVVAQKEDSHNQPPSSQSQPSQQPEANVSEPVEPEQLTQYTPQPCRNPLSQSIPDSGRSSDSNRIPQTNQSNPSFEVDGGQKGNKRRSTRRPPPTGQSFIPNLDPEKPPTFYVPVEEDEFSDENPGHHCYSSEDLHSIASDDDTETPIFPQSNADAPVSQVRLELGMEFETLNQFRKAVRKFNIHIGRSIFFARCDSTRSKAICYDEDCPWQIYCAKRTFSASYQLDFPSSIFPFILFELDELLQVPSLAGELYLRNDMLGLTRKFLLSLCALETG 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02223 625 CDD REC_typeA_ARR 11 139 - -
Adu08g02223 625 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 167 - -
Adu08g02223 625 SMART REC_2 9 143 IPR001789 GO:0000160
Adu08g02223 625 Pfam MuDR family transposase 510 568 IPR004332 -
Adu08g02223 625 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 167 IPR045279 GO:0009736
Adu08g02223 625 Pfam Response regulator receiver domain 11 136 IPR001789 GO:0000160
Adu08g02223 625 SUPERFAMILY CheY-like 9 160 IPR011006 -
Adu08g02223 625 MobiDBLite consensus disorder prediction 143 165 - -
Adu08g02223 625 MobiDBLite consensus disorder prediction 325 354 - -
Adu08g02223 625 MobiDBLite consensus disorder prediction 355 427 - -
Adu08g02223 625 MobiDBLite consensus disorder prediction 325 460 - -
Adu08g02223 625 Gene3D - 10 185 - -
Adu08g02223 625 ProSiteProfiles Response regulatory domain profile. 10 144 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02223 Adu-Chr8 37223907 37228636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02223 1 152 Response Regulator Gene Family AT3G57040 63.694 6.75e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu08g02223 Response_reg 2.1e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02223 K14492 - adu:110276063 506.523