LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g02212	ATGAAAATCCCATCAATGCCATCATCACCCTCCTTCTCCTTTGTTCTACTCTTCCTTTTATTCCTCATTGTACCATTACTACAAGCCCAACAACAATCTCCATCAAAAAACGCCCCTCCTCCTCCCCCTTCATTGCCTCCGCCTGCTTCGGCTCAAAAACATTTTCCTCCTCCACCTCCACCTTCTTCTTTGACTCGAAAAGTTGCTCCACCTCCTCCTCCTCCTTCACTGCCTCCACCTCCAACTTCTTCTCCACCTCCTCCTTATTTTCCACGAAAATATGCTCCTCCTTCTCCACCTTCCTCTTCTTCTCCGGCTCCAATGCTTACCCCTCCTTCTCCGTCTTCAAAACACTCCCCTCCTCCGTCTCCACTACCACCTTCTACCTCTTCAGCTCCAGCATCTCCTCCTCCTCCTCCTTCCTCCAAAGAAGCCTGCAAGTCTACACTGTACCCAAAACTCTGCCGCTCCATTCTAAAATCCATTCGCTCGTCACCATCCGATCCATACAACTTAGGGAAATTCTCCATCAAACAAAGCCTCAAAAAAGTCAAGAAGCTAGCAAAAGCGTTCGATGACTTCCTCCACCACAAGTCGACTTCTTACCTCAACCAAGCCGAGATCTCGGCTCTCGACGACTGCCGCGACCTCAACCAACTCAACGTAGACTACCTCCAAACCGTCTCCGACAACCTCAAATCTGCGACCTCGTTAGACAGCAATGGAAATGAGGAATTGGTGGAGGACATCGAAACGTATCTGAGTGCGGTGGCTACTAACCACTACACTTGCTATGATGGGTTGGTGGCGGCGAAGAGTAACATCGCAGATGCGCTGGCGGTGCCTCTGAACGATGTGAAGCAACTGTATAGTGTGTCGCTTGGGTTGGTTACGGAGGCTCTGAACAAGAATAGGAAGAAGCATAAGACAAGAAAGCATGGTCTCCCTACTAATGACTACAAAGTTAGACAGCCTCTCAAGAAGCTCATTAAGTTTCTTCACACAACAAGTAATAGTTGCAAAGAATCATCATTCAATTGTACAAGGAAAAGCGAAAGGATTCTTGAAGAAAGCAATAACAGCAAAGGAATTCTACTGAACAGCTATGTGATTGTGAGCATTGATGGGACAGGGAACTTCACTTCCATTGGAGACGCCATTGCTTTTGCTCCGAACAATTCAAGAGCAGAAGATGGGTATTTCCTTATCTATGTCACAGAAGGGTGCTACGAGGAATATGTCACTATCCCCAAACAAAAGACTAACATTTTGCTTGTTGGAGATGGTATCAATAAGACTGTCATCACAGGGAATCATAGTGTCATTGATGGTTGGACAACTTTCAATTCTTCAACTTTTGCTGTTTCTGGAGATAGATTCATGGCAGTAGATATTACATTCAGAAACACAGCTGGCCCTGAGAAGCACCAAGCAGTAGCACTTAGAAGCAACGCTGACCTCTCCACCTTCTACCGATGCAGTTTTGAAGGATATCAAGACACACTCTACGTTCACTCTCTAAGACAATTTTACAGAGAATGTGACATCTATGGAACGGTAGACTTCATCTTTGGTAACGCCGCCGTAGTTTTCCAGAGCTGCAACATCTATGCAAGAAAGCCAATGACTAACCAGAAAAACTCCGTCACGGCGCAAGGCCGGACGGATCCAAACCAAAACACCGGAATCTCAATCCAAAATTGCACCATCCAGGCCGCCCCTGACTTGGCGGCCGACGTGGAATCCACGCCGAATTACTTAGGTAGGCCGTGGAAAGAGTACTCGAGGACGGTTTATATGCAGTCATATATTGGTGCCTTGATTAACCCTTCTGGATGGTTAGAGTGGAATGGGACCGTTGGGTTAGACACACTCTTCTATGGTGAATTTAATAACTATGGTCCTGGTGCTGGTACAAGTAACAGAGTAAAATGGAAGGGTTACAACTTGTTGAATGCTACTCAAGCTTGGAATTTTACTGTTCTTAATTTTACTTTGGGAGATACATGGCTTCCTTACACTGATATACCATACACTGCAGGCCTAGAAGATTAA	2055	0.4594	MKIPSMPSSPSFSFVLLFLLFLIVPLLQAQQQSPSKNAPPPPPSLPPPASAQKHFPPPPPPSSLTRKVAPPPPPPSLPPPPTSSPPPPYFPRKYAPPSPPSSSSPAPMLTPPSPSSKHSPPPSPLPPSTSSAPASPPPPPSSKEACKSTLYPKLCRSILKSIRSSPSDPYNLGKFSIKQSLKKVKKLAKAFDDFLHHKSTSYLNQAEISALDDCRDLNQLNVDYLQTVSDNLKSATSLDSNGNEELVEDIETYLSAVATNHYTCYDGLVAAKSNIADALAVPLNDVKQLYSVSLGLVTEALNKNRKKHKTRKHGLPTNDYKVRQPLKKLIKFLHTTSNSCKESSFNCTRKSERILEESNNSKGILLNSYVIVSIDGTGNFTSIGDAIAFAPNNSRAEDGYFLIYVTEGCYEEYVTIPKQKTNILLVGDGINKTVITGNHSVIDGWTTFNSSTFAVSGDRFMAVDITFRNTAGPEKHQAVALRSNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIYARKPMTNQKNSVTAQGRTDPNQNTGISIQNCTIQAAPDLAADVESTPNYLGRPWKEYSRTVYMQSYIGALINPSGWLEWNGTVGLDTLFYGEFNNYGPGAGTSNRVKWKGYNLLNATQAWNFTVLNFTLGDTWLPYTDIPYTAGLED	684

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g02212	684	SMART	PMEI_2	137	296	IPR006501	GO:0004857
	Adu08g02212	684	SUPERFAMILY	Pectin lyase-like	367	681	IPR011050	-
	Adu08g02212	684	CDD	PMEI-like_3	145	299	-	-
	Adu08g02212	684	Pfam	Pectinesterase	370	667	IPR000070	GO:0030599\|GO:0042545
	Adu08g02212	684	Pfam	Plant invertase/pectin methylesterase inhibitor	143	295	IPR006501	GO:0004857
	Adu08g02212	684	PANTHER	PECTINESTERASE	135	682	-	-
	Adu08g02212	684	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	144	298	IPR035513	-
	Adu08g02212	684	MobiDBLite	consensus disorder prediction	29	147	-	-
	Adu08g02212	684	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	143	298	IPR006501	GO:0004857
	Adu08g02212	684	Gene3D	-	367	684	IPR012334	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g02212	Adu-Chr8	36983819	36988616	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu08g02212	113	682	Carbohydrate Esterase	AT3G10720	57.239	0.0	683

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g02212	K01051		-	gmx:100776781	835.099

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