Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02172 ATGGCAAAACCAGTTTCCAATTCCAATTCCCACTCACACCTAATTCCATTACTCATTTTGATCCTGTTCTTTTCCACCACCTTCCATCTCTCAGAGCAGTTACAATTTTCTCAGACCCAAACACTTCAAAACTTCCAGAACCTTCTCGGCTACCCCCAAGAACTTTTAACCCTCAACACCAACACAGACTTCTGCAACATTGAACCAACCCCACACTTCACACTCGTTTGCTATGAAGAAAATCTCACACAGCTGCATGTTGTTGGCAACGGTTTCAGTCCCAACGCATTGCCACAGAACTTCTCGTCACAAACACTATTCGCCACACTCGCCACACTCTCAAGCTTAAAAGTCCTCACTCTCGTTTCTCTTGGTCTCTGGGGTCCAATACCTCCAACCATTTCTCAGTTATCTTCTCTTGAAATACTCAACATAAGTTCAAACCATTTCAGTGGTGTTGTTCCGTCACAGATTTCACTTCTCAAGAACCTTCAATCACTGGTTCTTGATAACAACCTTTTACAAGGCGTTATTCCAAGCGAAATAGGGACTCTTCAAGGCTTGGCTGTGCTTAGTATGAAGAACAATTCGCTCAGTGGAACCGTTCCAGATTCAGTTAGAACATTACAAACTCTGCGAGTTTTGGATTTGTCAAATAACAAAATCTCAGGGGATTTACCTAGCCTTCGCCATCTGTCGAACCTTCAAGATCTTAACCTGGAGAACAACAAATTCGGGCCTCATTTTCCATCTCTTCCAACTAAATTGGTTTCGCTTGTTCTAAAGAATAACAGCTTTAAGCTTGGTCTTCCTTCGGGTTTATCCACTTTCTACCAGCTTCAGAAACTCGACGTTTCGCTTAATGGTTTCGTTGGGCCGTTCTTGCCTGCATTGTTATCTCTTCCTTCTCTTAGTTACCTTGATGCTTCCTCAAACAAGTTCACCGGAATGCTGTTCAAGAACGACACGTGTAATGATGAGCTCGTTTTCGTGAACTTGTCTTCGAATCTGTTGAGAGGGGAACTTCCCACATGTTTGAAACCAGTGGCCAATAAGCCGGTCGCTCTATACGCCGGGAATTGTTTATCGAACGACGACGGCCGGAATCAGAACCCTGCCAGCTTCTGCAGCAACGAGGCTATTGCTGTTAAAATCATGCCTCCTCAAGAGAATCACAAGAGGACAACCGGAAAAACGGTTCTCGTGTCCAGTATGGGAGGGATAGTTGGTGGAGCATTGATTGTTGGAGTGGTTATTTTGGTAGTTAGCCGGGTTCATAAGAAGGGTAGTGTTGTAAAAACACCTGTGAAACCGACCTTGGAGATTGTTATCAGCCAGGCGAAAAAGGAAGAGGAAGACGAAGACAAAGAGGAAGAAGAAAAGGAAAAGGAAAAGGAAGGCATGGTAGCTGCTTCTTCAAGATCCTTGTCCATATCCGTGTTGCAGCGGATTATGAAAAGGGTGCCGGATAAGGGCGCTGTGGAGTCGTTTACAAGGTCCATGAAGGAGCATGTCATGAACAGAATGCATAACAAAAATGGTGTGAGGACAAGTACAAGGTCTATAATAGAACATGCATCTTCAGTCAACACAGCAAAGCTGCTCACAGATGCAAGGTATATATCAGAAACAATGAAGATGGGAGCCAGCTTTCCAGCTTACAGAACCTTTGCTTTGGATGAACTGAAGGAAGCTACAAATAATTTTGATGCATCAAGTTTCGTTAGTGAGGGTCCACATGGCCAGATATACAAGGGGGTGCTCTCCGATGGAATGCCTATTACAATCAGAGGATTGAAAATGCGAAAGAGACATAGCCCTCAAAATTACATGCACCACATTGAGTTGATTTCGAAACTTCGGCATTCACACTTGATCAGTGCTCTTGGTCATTCATTTGAATGCAATCAGGATGATTCAAGCGTCAGCACTATATTCCTCATATTTGAGTTTGTTCCAAACAAGAGTTTAAGGAGTTGTGTGTCTGGATCTCCTAGTGAAAAGCTTTCTTGGACGCAGAGGATACTAGCCGCGATTGGAGTGGTAAAAGGCATTCAATTCTTGCACACAGGGATAGTGCCTGGACTATATTCCAATAATCTGAAGATAACTGATGTTCTTTTGGATAACAATCTTAATGTTAAAATAAGCAGTTATAATCTGCCACTCTCTGCAGAAACTAGAAGACTGGTCAGCAATGGACCTTACCCTGGATTAAAAGGAAACTTCCAAGAAAGGATAATGGATGCAGACAAGAATGATGTCTATGATATTGGGGTAATCTTGCTTGAAACCATTTTGGGTCGACCATTGATGTTCCACAATGAAGTTGGCACTCTCAAAGATCTTTTACAAGTAAGCATAAAAACTGATGATATGGCAAGGAGGAGTATTGTTGACCCAGCAGTTCACAAGGAATGCTCAAATGAATCATTAATGACAATGATGGAGATTTGTGTAAGGTGCCTCTCCAATGATCCTACTGAAAGGCCTTCTGTGGATGATGTTCTCTGGAATCTGCATTTCGCTGTGCAAGTTCAGAATTCTTGGAGGAGAGATTCTAATGATCAGAGAGGCTCACCTGCATCATCATCCTCCCATGAGACAAGAGTTGTATGA 2619 0.4292 MAKPVSNSNSHSHLIPLLILILFFSTTFHLSEQLQFSQTQTLQNFQNLLGYPQELLTLNTNTDFCNIEPTPHFTLVCYEENLTQLHVVGNGFSPNALPQNFSSQTLFATLATLSSLKVLTLVSLGLWGPIPPTISQLSSLEILNISSNHFSGVVPSQISLLKNLQSLVLDNNLLQGVIPSEIGTLQGLAVLSMKNNSLSGTVPDSVRTLQTLRVLDLSNNKISGDLPSLRHLSNLQDLNLENNKFGPHFPSLPTKLVSLVLKNNSFKLGLPSGLSTFYQLQKLDVSLNGFVGPFLPALLSLPSLSYLDASSNKFTGMLFKNDTCNDELVFVNLSSNLLRGELPTCLKPVANKPVALYAGNCLSNDDGRNQNPASFCSNEAIAVKIMPPQENHKRTTGKTVLVSSMGGIVGGALIVGVVILVVSRVHKKGSVVKTPVKPTLEIVISQAKKEEEDEDKEEEEKEKEKEGMVAASSRSLSISVLQRIMKRVPDKGAVESFTRSMKEHVMNRMHNKNGVRTSTRSIIEHASSVNTAKLLTDARYISETMKMGASFPAYRTFALDELKEATNNFDASSFVSEGPHGQIYKGVLSDGMPITIRGLKMRKRHSPQNYMHHIELISKLRHSHLISALGHSFECNQDDSSVSTIFLIFEFVPNKSLRSCVSGSPSEKLSWTQRILAAIGVVKGIQFLHTGIVPGLYSNNLKITDVLLDNNLNVKISSYNLPLSAETRRLVSNGPYPGLKGNFQERIMDADKNDVYDIGVILLETILGRPLMFHNEVGTLKDLLQVSIKTDDMARRSIVDPAVHKECSNESLMTMMEICVRCLSNDPTERPSVDDVLWNLHFAVQVQNSWRRDSNDQRGSPASSSSHETRVV 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02172 872 Gene3D Phosphorylase Kinase; domain 1 530 651 - -
Adu08g02172 872 Gene3D Ribonuclease Inhibitor 250 361 IPR032675 -
Adu08g02172 872 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 14 425 - -
Adu08g02172 872 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 518 861 - -
Adu08g02172 872 SUPERFAMILY Protein kinase-like (PK-like) 548 842 IPR011009 -
Adu08g02172 872 SUPERFAMILY L domain-like 37 343 - -
Adu08g02172 872 SMART LRR_typ_2 137 160 IPR003591 -
Adu08g02172 872 SMART LRR_typ_2 232 259 IPR003591 -
Adu08g02172 872 SMART LRR_typ_2 209 231 IPR003591 -
Adu08g02172 872 SMART LRR_typ_2 161 185 IPR003591 -
Adu08g02172 872 SMART LRR_typ_2 301 321 IPR003591 -
Adu08g02172 872 Pfam Protein tyrosine and serine/threonine kinase 575 837 IPR001245 GO:0004672|GO:0006468
Adu08g02172 872 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 425 - -
Adu08g02172 872 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 518 861 - -
Adu08g02172 872 MobiDBLite consensus disorder prediction 447 469 - -
Adu08g02172 872 ProSiteProfiles Protein kinase domain profile. 569 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02172 872 MobiDBLite consensus disorder prediction 851 872 - -
Adu08g02172 872 Gene3D Ribonuclease Inhibitor 37 157 IPR032675 -
Adu08g02172 872 Coils Coil 440 467 - -
Adu08g02172 872 ProSiteProfiles Leucine-rich repeat profile. 211 233 IPR001611 GO:0005515
Adu08g02172 872 Pfam Leucine Rich repeats (2 copies) 211 244 IPR025875 -
Adu08g02172 872 Gene3D Ribonuclease Inhibitor 158 249 IPR032675 -
Adu08g02172 872 Gene3D Transferase(Phosphotransferase) domain 1 652 865 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02172 Adu-Chr8 36142335 36147566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02172 471 866 Miscellaneous Gene Families AT3G03770 54.501 1.48e-136 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Adu08g02172 PK_Tyr_Ser-Thr 1.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02172 - - adu:107462774 1554.27