Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02141 ATGGCTGACCCACCTCCACCCAAGCGCCATAAAATTGTTAGAGGAGATGATGATTATATGCCCGGAAACATTCTTGAGATTGAGCTTTCTAAGTTTATGACCTTTGATCACGTGAAATGCAAACCTGGGCCTCGATTGAATCTTGTAGTTGGACCCAATGGTTCTGGAAAAAGTTCTCTCGTGTGTGCTATTGCACTTGGCCTTTGTGGAGAGCCTCAGTTGCTTGGGCGAGCAACTAGTGTCGGGGCATATGTGAAGCGGGGAGAGGAGTTTGGATCCATTAAGATTACATTGAGAGGGAATAACAAAGATGAGTGTATTGCCATTACTCGCAAAATAAATACTAACAACAAGTCTGAGTGGTTGTTAAATGGGAATATAGTTCCCAAAAGTAATGTAGCTGAAACTGTTAAAAGGTTTAACATCCAAGTCAGTAACTTGACTCAATTTTTACCACAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCAGTGCAGCTCCTGGAAGAAACTGAAAAGGCTGTTGGTGATCCACAACTTCCCGAGCAACATCGTGCACTAGTTCATAAAAGTTATGCATTGAGGAATATTGAAGTGTCTATGGAGGGGCATTTAGGTACCTTGAATCTGTTGAAGAAACAAAATGCTGAGCTAGAGAAGGATGTTGAGCGTGTCCGTCTAAGAGATGAGATTCTTGCCAAGGCTGAAACCATGAAAAAGAAATTGCCTTGGCTTGAATATGACATGAAGAAGGCTCAATATTGGGAAGCTAAGCAACATGAGAATAATGCGGCAAAGGCAATGGAGGAGTCTGCAAAGTTACTAAATGATCTTAAGGATCCTATTAACAAACAGAAGGAGGAACAGACTGCACTAGATGCCAAATGGAAAAAGGTTGACAGCCGTATAAAAGAGAACTACAAGAAGCGGACGGAACTTCTGGATAAAGAGAGCCAACTGGATGTGGAGATGCAAAGGAATTACAAGGATATGGAAGATTTGAGAAGACAGGAGGAAACTAGGCAAAAAAAAATTGAAAAAATTAGGGAGGAACTTGCTGCTTCTGAACTTGAACTTGAGAATCTAGGTCCTTCTGAACCTCGTCAGCAAGAAGAGCTGCAAAGACTAAGAGCTAAAGCCTCTGATATCGATTATGAAGCTAAGCAAGTGATGAAGCCTCGCATATCACTACTAGAGAGGGAAATAAGTCATAAAGTGACATCCTTGAATGAATGTAAAAAAAGGTTGAGCGAAATGAACAATAAAATTACAAAATGTTTGCATGTATTGCAAGAAGCAGGGACAGACAAAATTTTTGAAGCCTTTAAATGGGTCCAAGAACATCGTAAAATCTTCAATAAGGGGGTTTATGGCCCAGTATTATTAGAGGTGAATGTCTCAAATCAAGATCATGCTGCTTATCTAGAGGGTCAAGCTGCGCAATATATTTGGAAGTCTTTCATAACACAAGATCCTCGTGATCGGGACCTCTTGGTGCAGCACCTAAAGTTCTTTGATGTTCCAGTTTTAAATTATACTGGTGAAGTTGACCAACAAAGAGAGACTTTCAGAATTACTGAAGATATGCATGCCCTTGGCATTCACTCCCGGCTGGACCAAGTTTTTGATGCTCCTAGTGCTGTCAAGGAGGTTTTGATTCGCCAGTTTAATTTGGATCATTCTTATATTGGATCCAGAGATACTGATAAGAGGGCTGACGAGGTTCCAAAATTGGGAATTATAAATTTGTGGACACCGGAAAATCACTACCGGTGGTCTAAGTCTAGATATGGGGGTCATATCTCAGCCATGGTCGAACAAGTGGGAGATCCGAAGTTTATAGTGAATAGTTCAAATGCGGGAGAAATTGAGAAGCTGGAATCCCAGGAAAAGGATCTTGAAGGAATTATTGCTACCTTGGAGGAAGATGCTAAAAGATCTCGAGATAAGCAAAAGGCCTTAATTAATGAATATGCTGATCTTCGTAGAAAGATGGAGGAGATTAATAAATTATTCCAACTAGAGAAACAAAAACGTGAAGGTATTCACAACCGTATTGGGAAAAAGAGAGCTGCACTGAAATCATTGGAGGAATCCATTGATAGAGATACCGAGATGGCAAAGCTTGTTGATCAGGCAAATAAACTTCACATTCTGAGATTCCGTAATGCAATGAAATTAAAGGAACTTCTCGTTGAGTGTGTTGCTTACAGAAGAAGCTTTATTGAACAACGGATGTCTTCTATTCAATTTGATGCTAAGATTCGCAAATTGGAGGCAGATTTAAAGCAGCATGAGAGGTCTGCCGTTGAAGCAACTATACAATTTCAGAACCTTAAGAAAGAAACTGAGGCTTGTGAACAGCAGCTGACAGATTCTTTGAATCTTGCTGAATCAATTGCGCCATTGACACCTGAGCTACAGAACAAATTTCGTGAGATGCCCACTACAATTGAGGATTTAAATAATGCTATTCAAGAAACAATCTCTGAGGCCCGGGCAATATTTACACTTAATAATAATGCATTGGAGGAGTATGAGTATCGGCGACAAAAGATAGAAGAGCTTGCAGAAAAAATCGCTGCAGAGAAGGAAGAATATGGAAGGTCTTCTACTGAAATAAAGGAAATCGAGGATAAATGGCTTCCAGCACTTCGAAACCTTGTGGCACTGATCAATGAAACTTTTAGCCGTAATTTTCAAGAGATGGCTGTTGCTGGTGAAGTTTCACTAGATGAGCATGATAAGGAGTATGCCCAATATGGAATTTGTATTAAAGTCAAATTCAGACAAAATGGAAAACTTGAAGTTCTTAGTGCTCATCATCAATCTGGAGGGGAGCGGTCAGTTTCAACTATCGTATATCTTCTTTCCCTTCAAGATCTTACTAATGTCCCATTTAGAGTTGTTGATGAAATCAACCAGGGCATGGACCCAATAAACGAAAGAAAGATGTTCCAGCAACTGGTCAGAGCTGCAAGCAAGCCCAATACACCACAGTGTTTCTTGCTTACCCCCAAATTGCTACCAGACCTGCAATATAGTGAAGCATGCACTATATTGAACGTGTTTAATGGCCCTTGGATTCCCCAACCCTCAAAGCTATGGGAGGAAGGTGAAAGATGGAGTATTGTCACGGGTCTCTTGGGGGAAACCCATTGTTGA 3165 0.4063 MADPPPPKRHKIVRGDDDYMPGNILEIELSKFMTFDHVKCKPGPRLNLVVGPNGSGKSSLVCAIALGLCGEPQLLGRATSVGAYVKRGEEFGSIKITLRGNNKDECIAITRKINTNNKSEWLLNGNIVPKSNVAETVKRFNIQVSNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRALVHKSYALRNIEVSMEGHLGTLNLLKKQNAELEKDVERVRLRDEILAKAETMKKKLPWLEYDMKKAQYWEAKQHENNAAKAMEESAKLLNDLKDPINKQKEEQTALDAKWKKVDSRIKENYKKRTELLDKESQLDVEMQRNYKDMEDLRRQEETRQKKIEKIREELAASELELENLGPSEPRQQEELQRLRAKASDIDYEAKQVMKPRISLLEREISHKVTSLNECKKRLSEMNNKITKCLHVLQEAGTDKIFEAFKWVQEHRKIFNKGVYGPVLLEVNVSNQDHAAYLEGQAAQYIWKSFITQDPRDRDLLVQHLKFFDVPVLNYTGEVDQQRETFRITEDMHALGIHSRLDQVFDAPSAVKEVLIRQFNLDHSYIGSRDTDKRADEVPKLGIINLWTPENHYRWSKSRYGGHISAMVEQVGDPKFIVNSSNAGEIEKLESQEKDLEGIIATLEEDAKRSRDKQKALINEYADLRRKMEEINKLFQLEKQKREGIHNRIGKKRAALKSLEESIDRDTEMAKLVDQANKLHILRFRNAMKLKELLVECVAYRRSFIEQRMSSIQFDAKIRKLEADLKQHERSAVEATIQFQNLKKETEACEQQLTDSLNLAESIAPLTPELQNKFREMPTTIEDLNNAIQETISEARAIFTLNNNALEEYEYRRQKIEELAEKIAAEKEEYGRSSTEIKEIEDKWLPALRNLVALINETFSRNFQEMAVAGEVSLDEHDKEYAQYGICIKVKFRQNGKLEVLSAHHQSGGERSVSTIVYLLSLQDLTNVPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACTILNVFNGPWIPQPSKLWEEGERWSIVTGLLGETHC 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02141 1054 Coils Coil 331 351 - -
Adu08g02141 1054 Coils Coil 201 228 - -
Adu08g02141 1054 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 18 1050 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Adu08g02141 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 315 IPR027417 -
Adu08g02141 1054 Gene3D - 23 203 IPR027417 -
Adu08g02141 1054 Coils Coil 623 678 - -
Adu08g02141 1054 Pfam RecF/RecN/SMC N terminal domain 24 995 IPR003395 -
Adu08g02141 1054 Coils Coil 257 277 - -
Adu08g02141 1054 Coils Coil 748 789 - -
Adu08g02141 1054 CDD ABC_SMC5_euk 927 1029 - -
Adu08g02141 1054 Gene3D - 848 1012 IPR027417 -
Adu08g02141 1054 CDD ABC_SMC5_euk 22 179 - -
Adu08g02141 1054 Coils Coil 839 880 - -
Adu08g02141 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 722 1005 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02141 Adu-Chr8 35628098 35654890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02141 8 1043 Structural Maintenance of Chromosomes family AT5G15920 55.792 0.0 1145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02141 K22803 - gmx:100778678 1459.12