Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02117 ATGGAGGCCGCAGTGATCGATGCCGGCTCAATGCTCCTCAAGGCCGGTTTCGCAGTTCCCGATCAACCTCCTGCATTGATAATTCCCACACAGATGAAGCGAATGCTTGATGATGGGTCAGGAAATGATAATCCAGCAGTAGATGACTTTGCGGTTGATCCGGTGGTGAGAGGTTTTGTAAGTGATTGGGATGCCATGGAGGATTTGTTGCATTATGTATTGTACACTGGGCTTGGATGGGAAATGGGAAATGAAGGCCAGATACTATTTACAGATCCACTTTGTACCCCAAAGGCTAACAAAGAACAGTTAGTGCAACTAATGTTTGAAACATTCAACATATCAGGGTTTTATGCATCGGAACAGGCAGTGTTGTCGCTATATGCTGTGGGACGTATCTCTGGATGCACAGTTGATATTGGTCATGGAAAAATAGATATTGCACCAGTAATTGAAGGTGCTGTTAACCACATTGCCTCAAGAAGATTTGAGTTTGGAGGTACTGATCTAACCAATTTCCTGGCACAAGAACTTGGCAAATCCAATCCACTAGTCAATATCAGCTTGTCTGATGTTGAGAAAATAAAACAACAATACTCGTGTTGTGCTGAAGATGAATTAGCTTATCAGAAGACCCGGAATTCTTGCCCTGAGGAGAAACATACCCTTCCTGATGGACAGGTGATAACAATTGGAAGAGAAAGATATACTGTTGGTGAAGCTTTATTCCAGCCATGTCTATTGGGTTTGGAGGCTCATGGCATTGTTGACCAGCTTGTTCGAACTATTTCAACTGTGTCATCTGATAATCATCGGCAACTCCTGGAAAATACTGTGGTCTGTGGTGGCACTTCTTCTATGACTGATCTTTGGTCTATGTTTAAAATGTTGGAATCACTGAATTTTCTGCTTTCTGAGTATCAGGGTGCCATGTTTCTTTTTGATGTTGGAATGTGGTTCAACAATTTTACTTTGTTATATTGGATTATGGTACAACTGAATATTGGTCCATTATATCCTCTTGTCCACTTCCAACCTTGA 1041 0.4179 MEAAVIDAGSMLLKAGFAVPDQPPALIIPTQMKRMLDDGSGNDNPAVDDFAVDPVVRGFVSDWDAMEDLLHYVLYTGLGWEMGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVNHIASRRFEFGGTDLTNFLAQELGKSNPLVNISLSDVEKIKQQYSCCAEDELAYQKTRNSCPEEKHTLPDGQVITIGRERYTVGEALFQPCLLGLEAHGIVDQLVRTISTVSSDNHRQLLENTVVCGGTSSMTDLWSMFKMLESLNFLLSEYQGAMFLFDVGMWFNNFTLLYWIMVQLNIGPLYPLVHFQP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02117 346 PRINTS Actin signature 45 67 IPR004000 -
Adu08g02117 346 PRINTS Actin signature 100 113 IPR004000 -
Adu08g02117 346 PRINTS Actin signature 125 144 IPR004000 -
Adu08g02117 346 PRINTS Actin signature 217 233 IPR004000 -
Adu08g02117 346 Gene3D - 5 122 - -
Adu08g02117 346 PANTHER ACTIN 1 296 IPR004000 -
Adu08g02117 346 PANTHER BNACNNG31150D PROTEIN 1 296 - -
Adu08g02117 346 SMART actin_3 1 326 IPR004000 -
Adu08g02117 346 SUPERFAMILY Actin-like ATPase domain 2 138 IPR043129 -
Adu08g02117 346 Gene3D Actin; Chain A, domain 4 165 252 - -
Adu08g02117 346 SUPERFAMILY Actin-like ATPase domain 131 294 IPR043129 -
Adu08g02117 346 Pfam Actin 2 290 IPR004000 -
Adu08g02117 346 Gene3D - 123 290 - -
Adu08g02117 346 CDD NBD_sugar-kinase_HSP70_actin 4 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02117 Adu-Chr8 35305978 35310903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02117 5 285 Cytoskeleton Gene Families AT5G09810 36.789 4.05e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02117 K16615 - gmx:100794153 535.028