Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02097 ATGTCATCGACGACTACACCATGCGCTGCATGCAAGTTCCTTCGTCGGAAGTGCACCCCGGAGTGCATTCTTGCACCGTACTTCCCAGCGAACAACCCACAGCTCTTCGAATATGTCCACCGCGTCTTCGGTGCCAGCAACGTCGGTAAGATCCTCAACGAGCTACCTCCATCCCAGCGCGAGGAAGCGGTGAAGTCTCTTGCGTTCGAGGCGGAGGCACGCCTCTGCGACCCGGTCTATGGCTGCACCCTCCAAGTCTGCATCCTCCAGAAGATACTCCGCCAGAGATGTGCCCTCCTCGCTAACGCCAAGAGAGAACTTAGCGCCTACATCAACCCACAAGCCATTCAAGGTCCATTCAACCTTCAGGAAAAGCCTCTGTCTTCACCTGCCGCCCATGTAGGCCCTCCCTGCAGCCCGAATGTTGTACAGTATTCACCCATTTTAGGCCCATCCTACGGTCCAGATGTTGTACGGTCTTCAGCCCATTTGGGCCTATCTGACGGCCCAGATGATGCACCGTTTTTTATGCCAGCTATGCAGCATAATGGGTCATTGGGTGGTGGTGCTGCTGACCCGCAGCTGGACCCAGGGCAGCAAGAGTTGTTGGAGGCCCAACAACTTGCTGCTTCTGCGGCAATCCGAGAACAGCAGCAAGCTATAATGATGAGGAATTATGTCCAGCAACAGCAACAGGAGTATCTAAGACACAATGTTGCTGCTGGGATTGAACCTGTTGCGGCTGCGGCGGCCTACAGCGGTGACGTCAGTGGAAGTGGAGTGTTTGGCCACATGGGTGCACCTTCAGGCGGTCAAGGAGGTGAGATGGCACCTTGTATGGGTTTGGAGACATTTGACAGTGGTGGAAGTTATCATCGACAGTTGCAACAGCCACAGCATGAAGTAGGGGAAAATTTCGTTGGTCTTGCAACTCAACATCACTACCCTCTTGGGGGCCAGTTGCTGCTCCCATCAGAGCAGCAAGAACTACCGTTGACCCAACAACAACAACAACAACTAGAACTACAAGTATTACAACAACAGCAGCAACTACAAGTATTACAACAGCAGCAACTACAACAACAACAACAACTGTCAGAGTGA 1104 0.529 MSSTTTPCAACKFLRRKCTPECILAPYFPANNPQLFEYVHRVFGASNVGKILNELPPSQREEAVKSLAFEAEARLCDPVYGCTLQVCILQKILRQRCALLANAKRELSAYINPQAIQGPFNLQEKPLSSPAAHVGPPCSPNVVQYSPILGPSYGPDVVRSSAHLGLSDGPDDAPFFMPAMQHNGSLGGGAADPQLDPGQQELLEAQQLAASAAIREQQQAIMMRNYVQQQQQEYLRHNVAAGIEPVAAAAAYSGDVSGSGVFGHMGAPSGGQGGEMAPCMGLETFDSGGSYHRQLQQPQHEVGENFVGLATQHHYPLGGQLLLPSEQQELPLTQQQQQQLELQVLQQQQQLQVLQQQQLQQQQQLSE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02097 367 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 234 - -
Adu08g02097 367 Pfam Lateral organ boundaries (LOB) domain 7 100 IPR004883 -
Adu08g02097 367 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Adu08g02097 367 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 3 234 - -
Adu08g02097 367 Coils Coil 337 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02097 Adu-Chr8 34980130 34981233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02097 1 116 AS2 family AT5G66870 62.931 2.32e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu08g02097 LOB 2.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02097 - - ahf:112710769 526.554