Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02084 ATGTTGCATTCCCGTTTCTTCAAGGCTATACTCAAAACTAATCTTCAAAGGATTATTTTCACACAGAAAATACCCAATAAGTTTTCAAGGAGACATGGAAGCGCTCTTTCAAATCCAGTGTTTCTTAAGCCTCCAGATGGCACTCTATGGAAAGTGTATTGGACAAAAAAGAATAGTGATGAAGTTTGGTTTGTAAAAGGATGGAAGGAATTTACCAAAAACTACTCTCTTAATGAAGGATATTTAGTTGTGTTTAAATATGAAGAAACTTCTCAGTTCGATGTAATCATACTTGAGACAAATGATCTAGAAATAGATTATTCCAAATATGAGACTGTGAATAGAAATGGCAAATGTGACCAGAGAGATGAGAAAACAGTTGGAATCTTAAAGGAAATCCCTGTAAAAAATAATGACGCTGGAAAAAGATTGACATTGTTTTCTCCTCAGCCTCATATGAAAGTCAGAGGTGAGAGCTCTACTCGAAGAAGAACATCATCTTTGAATTGGCCAAAGGAACTTAAAGCTCAGGAAATAGCTCAGAAATTCATCTCCTATAACCCTTTCTTCACACTGTTCATAAAGCCAAATTACCTCACAGAATACCAAGTGAATGTACCGACTTTGAAAGGTTACATTGAGGACAAGGTGAAGGACGTGGCGCTTAAGGTTGGGGAAAGACAATGGCAAGTAAAGTTGCTCCCTTGTCGCAGCTCGGCTCGCCGCCTCTCAGGTGGTTGGTCCTTGTTTGTCCATGAGAATGGGTTGCAAGCTGAAGATGTTTGTGTCTTTGAACTGATTAACATGGAAGATTCAGTTTTTAAGGTTCATGTTTTCAAAAGGTAG 846 0.3818 MLHSRFFKAILKTNLQRIIFTQKIPNKFSRRHGSALSNPVFLKPPDGTLWKVYWTKKNSDEVWFVKGWKEFTKNYSLNEGYLVVFKYEETSQFDVIILETNDLEIDYSKYETVNRNGKCDQRDEKTVGILKEIPVKNNDAGKRLTLFSPQPHMKVRGESSTRRRTSSLNWPKELKAQEIAQKFISYNPFFTLFIKPNYLTEYQVNVPTLKGYIEDKVKDVALKVGERQWQVKLLPCRSSARRLSGGWSLFVHENGLQAEDVCVFELINMEDSVFKVHVFKR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02084 281 SUPERFAMILY DNA-binding pseudobarrel domain 5 100 IPR015300 -
Adu08g02084 281 SMART B3_2 189 280 IPR003340 GO:0003677
Adu08g02084 281 SMART B3_2 6 101 IPR003340 GO:0003677
Adu08g02084 281 CDD B3_DNA 189 280 IPR003340 GO:0003677
Adu08g02084 281 Gene3D - 2 102 IPR015300 -
Adu08g02084 281 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 5 280 - -
Adu08g02084 281 CDD B3_DNA 5 98 IPR003340 GO:0003677
Adu08g02084 281 SUPERFAMILY DNA-binding pseudobarrel domain 187 280 IPR015300 -
Adu08g02084 281 Pfam B3 DNA binding domain 201 281 IPR003340 GO:0003677
Adu08g02084 281 Pfam B3 DNA binding domain 23 94 IPR003340 GO:0003677
Adu08g02084 281 PANTHER B3 DOMAIN-CONTAINING 5 280 - -
Adu08g02084 281 ProSiteProfiles B3 DNA-binding domain profile. 227 281 IPR003340 GO:0003677
Adu08g02084 281 Gene3D - 168 281 IPR015300 -
Adu08g02084 281 ProSiteProfiles B3 DNA-binding domain profile. 7 101 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02084 Adu-Chr8 34788417 34790616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02084 6 280 B3 DNA Binding Superfamily AT3G18990 27.811 5.49e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu08g02084 B3 1.3e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02084 - - lang:109346569 265.388