Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02053 ATGCGATTGTCTTCTAAATCTGGTTCTTCATCTAAGCATAAGAATGTTGGTAAATCTAGTCCGTGGCTTCGGAAGAAGCACAAGAGGTTAGACGCGATATGTGAGAAGGAGTACAATCGGAACCATGGTGATTCCAATGGGTGTGATGATGCTTTGATTACTGATGCTGCGGATTCAGCGGTTCGCCGAAGCTCCCGTGTTCGGCGTGCCCCGGTTCTGCTGGATGCCTCTCCTGCTCCTCCCAAGAAACGGCGGAAGTTAGGGAAGGTTGGAGTGCCTGCAGGGCGCATAGAGAGTGGCAAGAAGAATTTGGAGCAGCAGAGTCCCGGCAGCAGCATTGAGGGGAGTCCTTCGGCTTGGAGATCGAGGTTGCGGTCTAGGGCTAGGGGTGCAGGTTTTGAGGTCAATGATGAGAAGGAATTGCCCCGTCGGAAGAGGAAGCTTTTTGAGGATGTGGTTGTAAGTAGGGGTGATGATGAATTGAAGGTTGATAAGAAGAAGGAATTGGAAGGTGGAGTGCCAAGGATTGTTAAGTCGAAGAGACCAGCGAGGATCAAAGCTACAAAGCATGAAGAAGAGCTTAAAGTGAATGAGTCTCATGAAGTAGGGCCTAAGGAGAACGAATCTCATGAAGAGGGGCTGAGAGAGAATGAATCTCATGAGGAAGGGCTTCAAGAGAATGAATCTTTTGTAGCAAAGCAGACAGAGAAGGAGTCTTATGAAGGGCATAGAGAGAATGAGTGTCATGGTAATTTAGATGAGAGCAACAGTCAAGAAGTGGAGCTTACAGTGAACAAAGAGGAGGGTAATGATACGGTTCCAGTAACTGATGTGTCTGGCGGGAACCTTGTAATTATATTGGATGTGAATGGCCCTCCTATTATAGGGAATGGGGAGAGAAACATGTCAAGCAATTTGCAAACGGAGGAATGTAGTGACGGTAGTGAACAGTCTCCTTTGGAACATGCAGATGAACAGGATGATCGATGGGAACATGCAAATAAACAGGACGATCAGTTAGCATGTGAGAAGGAAGGCAATAATGCAAGTGAAGGAGCTGAAATTGCTGGGAGTTCAACAAAGCAAGTAGAAAATGAAGGATCAGCTGACAAGGAGGCTGAGATTGGTGAAAACACTTTGAAAGATGCAAACTATGTGACAAAGGATAAGCTGAAACAAGCTTCAAATGGCTCCCAACGGATCAAAGAGGGTCGACGGTGTGGATTGTGCGGGGGAGGCACTGATGGTAAGCCTCCAAAAAGGTTGCTTCAGGACAATGGTGAGAGTGAGAATGAAGCATATAGCGGTTCTTCGGCTTCAGAAGAGCCTAACTTTGATATCTGGGATGGTTTTAGTGATGAACCTGGCTGGCTTGGTCATCTCTTGGGTCCTATTAATGATAACTTCGGCATTGCTCGAATATGGGTTCATCAGCAATGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGGTTGGGATGCTTGAAGAATGTCAGGGCTGCACTTTACAGAGGAAGAGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCAACCTCAGGTTGTCGTGTTGATCGTTGTCCAAAAACTTATCACTTGCCTTGTGCAAGAGCAAGTGGTTGCATCTTTGATCACCGTAAATTTCTTATTGCCTGCACAGATCATCGGCATCTTTTCCAACCACATGGTAATAAATATTTAGCCCGGATAAAGAAGTTGAAAGCTAGGAAACTGAAGTGGGATATGAGGAAGCATTCAAATGATGCTTGGAGAAAGGATATTGCTGCAGAAGAGAGATGGCTTGAAAATTGTGGAGAGGATGAGGAGTTTTTGAAACGTGAGAACAAGAGACTTCATCGTGATTTATTGAGAATAGCACCAGTGTACATCGGTGGTTCAGACTCTGCATGTGAACCATCCTTTCAGGGATGGGAATCTGTTGCTGGACTTAAAGATGTCATCCAGTGTATGAAGGAAGTTGTTATTTTGCCTCTACTATATCCTGAGCTCTTTGATAATTTAGGGCTTACACCTCCCAGAGGTGTTCTTTTGCATGGGTATCCTGGAACAGGGAAAACCTTAGTGGTCCGGGCATTGATAGGTGCATGTGCCCGTGGCGATAGACGGATTGCATATTTTGCCCGCAAAGGTGCAGATTGCTTGGGGAAATACGTGGGCGATGCTGAGCGCCAACTAAGACTATTATTTCAGGTTGCTGAGAGATGTCAACCTTCTATAATATTCTTTGATGAGATAGATGGACTAGCACCTACCCGCACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTATCAACTTTGCTTGCTCTTATGGATGGTTTAAAATCCAGGGGTTCAGTTGTAGTCATAGGTGCAACAAACCGTCCTGATGCCGTTGACCCAGCACTTAGGCGACCTGGAAGATTTGATCGGGAAATTTATTTCCCACTGCCATCAACTGAGGACCGAGCTTCCATTCTGTCACTTCACACTCAGAGGTGGCCTAAACCAATTACTGGGTCCTTGCTTGAGTGGATTGCAAAAAAGACTCCTGGCTATGCTGGTGCAGATCTTCAGGCTCTCTGTACTCAAGCGGCTATCAATGCCTTGAAGAGGAATTTCCCGTTGCAAAAAGTTTTGTCCTTAGCTGAAGAAAAGCATTCTGGTTGGAAGAACCTTAGTCTACCATCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCATTTTTGCATTCCCCACTACCATGCTCCCGGAGAGAAGCAGGAAATGCCACTAATGATGTTGTATGCTCCCCTCTTCCTATCCACCTCATACCTTGTTTATTGGGGCCATTGTGCACACTTCTTGTATCTCTTGATGAAAATCTATGGTTGCCACCTCCTTTATCTAAAGCTGTAACAATGGTTAAGAATGAAGTGGTTTCTGCTCTAGACAAAAGGAAAATGCCTATTGATCACTGGTGGTTGCACATTGATGACTTACTGCAAGAAACAAATATTGCTTCTGAGATAAAGAGCAAGCTCATGTGTTTGGGCATTTTATCTGCAAATGATGGCTTTGGTGGTTCTCCTGATACTGCAGATGACACAGATGATAGCACTATGAAGTCTGATCCCTCCATAAAGAATCATTTGGGCATGCGTAGTGGCTTGTTTCTAGACAAGTCATTTGCATTTACTAATAAATCAGGATTTCGAATATTGATTTCTGGAAATCCCCGATCTGGCCAGAGACATCTTGCTTCCTGCTTTCTTTACTGCTTTGTGGGGAGTACTGAAATACAGAAGATTGATATGGCAACCGCTTCACAAGAAGGGCATGGAGATGTAGTGCAAGGCATTGCACAAATATTATTGAAATGTGCTAGTCTTCAATCTTGCATATTATTCATGCCAAGAATTGATTTGTGGGCTGTAAACAAACATGTCCAAATCTATGAGAAGGAAAGTGAGTTGAATACAGAGAAAAGCTCTGCAGAGATTACTGAAGGCGAGGCCAACAAGAAGGCTTCACATGCCTGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGTGTATCGACGTCCTTGATGATTCTGGCTACTTCAGAAGTTTCGTATACAGAACTTCCAAGTAAGATAAGGGAATTCTTCAAGAGTTATCAATCTAAAGACAGCCAATCAACTCCTTTGCAGCAAACAATCCCTCGACTCTCACTGCATCTTGATAGTAATTTTGATAATGAGACGTTGATCACTCTGTCTGTAGAAGAGCTACTGAGAAATTTAGTTGAGCAGCAGATTCAATTGATTCATCAGAGCTCTCATGTTCATCTGGGTGTCCGAAAGGTTTCTGTTGAAGCTTGTGAAGAGAAGGTATGCCAGAGTAAAGATAATGGATCAGTTGATGAAGAGAAGAGTGAAACCCAAGTTCCTAAATCCACATCAGCGCCTCCACCGCCACCACCACCCCCCGATGGTAGGTCTCTGAAGGAAAAGTCAACCTTGTCACTAGCAATATCCACATTTGGTTATCAAATTCTTCTATTCCCACATTTTGCTGAACTTTGTTGGGTCACATCAAAACTCAAAGAAGGTCCTTGTGCTGATGTAAGTGGACCATGGAGGGGGGGCTGGCCTTTTAATTCCTGTGTAATTCGTCCCAATAATTCACTAGACAAGTCAATGGTTCCTGGTAGCTCTGGTGGTGTTAAAAGCAAAGAAAGATCTGGTTTAGTTAGAGGCTTGATTGCCGTTGGTTTATTGGCTTACAGGGGTGTTTATAAATCAGCCAGGGAAGTTTCTCTTGATGTGAGGAAAGTTCTTGAGATCCTAATTGAGAATATCAATGCAAAAATTCAAGCTGGGAAAGACAGATATCAATATCTTCGCATTTTATCGCAAGTGGCTTATTTGGAAGATATAGTAAACAATTGGGCTTATGCATTGCACAGTATGGATAAGGATTCCTTGGAGCCTATATCGAAAGTCATGTCGTCAAGTGATGGGTTAAACAGTCATCTCTCGTGTGTAGATCACCAAGCTGAAACTAAGGATGTTCATATGAACGGTGATGATTCGGAGAACCCAGGGAGAAGTTGTAAGGAAATTCATGCTGAAACAACTGGATTTCCTGCCATGAATAAGAAAAATGATAATACAGATAAACTTGATCACGATGGTAGACATACAAATACAAGCGCTAAAGAATGTCTACCAAATGATTCTTTAAACAATCACTCTGATGACTCTGCTGCTGCAAACCAACCTGTTGATCCATCCCCAAATCAGGAGAATGGATTGCTATCCCGTGAGGTGGCTGAAGGAGATGTCAGGATGTCAGAAGAATTAGGTAAATCCACATCCACTCACTCTGCTGTCCTTTCAGAGAATGGACTTCACACTGCCTTAGAACAAGAAGGTCTTAATGGAGGTACTGTAAGTACCATCTCTAATCAGCCCCCGACCTTGTCCACAGAAGAGACTGGTGTAACTGATGTTTACTCTCGCAAACATGAGAATGCTACAGGTATTGATATCTCTTCAAGTAAAGGCCATGAGCATGCTGAACCTGCGGTCGTTTGCATGTATCAATGTTGCCCTAGATGTCTTCACAGCTTATATCTTGCAATACGCAAGCTTCTCACCAGTGAGTTAAGCGTTAACCATAGAACAGTAGAAGATGTCCATGATGCTGTTTCATCATTATCCGTGGATCTTATTTCAGCAATTAGAAAATGTCACATTGAAGACCTTAATGATTTTTCTAACAAAACCTTCAAAAGAGAAAGGCATGGAATAACTTTGAACTTGAGAACATGTGACTCCAAAAACCAAGACAAGGACTTTGTGGCAGCTGAGTGTGTTACTCACTCAACAAGCCAGGAGGCAACTGCAACCAAAGATGAGGTAGTGAATGAATCACTGAAGCTTGATTTAAAATTTATATTCAGAGATGGTGTGCTGGTTCCTATGAACCCAGACAAAGATGTTTCTCTTCATTGTAAATTTGAAACTCTGTGCCTTTGTTCTCTTAGAGAGTTGATAGTAATGACCAAGAGCCCTTTTGATTAA 5553 0.4345 MRLSSKSGSSSKHKNVGKSSPWLRKKHKRLDAICEKEYNRNHGDSNGCDDALITDAADSAVRRSSRVRRAPVLLDASPAPPKKRRKLGKVGVPAGRIESGKKNLEQQSPGSSIEGSPSAWRSRLRSRARGAGFEVNDEKELPRRKRKLFEDVVVSRGDDELKVDKKKELEGGVPRIVKSKRPARIKATKHEEELKVNESHEVGPKENESHEEGLRENESHEEGLQENESFVAKQTEKESYEGHRENECHGNLDESNSQEVELTVNKEEGNDTVPVTDVSGGNLVIILDVNGPPIIGNGERNMSSNLQTEECSDGSEQSPLEHADEQDDRWEHANKQDDQLACEKEGNNASEGAEIAGSSTKQVENEGSADKEAEIGENTLKDANYVTKDKLKQASNGSQRIKEGRRCGLCGGGTDGKPPKRLLQDNGESENEAYSGSSASEEPNFDIWDGFSDEPGWLGHLLGPINDNFGIARIWVHQQCAVWSPEVYFAGLGCLKNVRAALYRGRALKCTRCGRRGATSGCRVDRCPKTYHLPCARASGCIFDHRKFLIACTDHRHLFQPHGNKYLARIKKLKARKLKWDMRKHSNDAWRKDIAAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSACEPSFQGWESVAGLKDVIQCMKEVVILPLLYPELFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDRRIAYFARKGADCLGKYVGDAERQLRLLFQVAERCQPSIIFFDEIDGLAPTRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSTEDRASILSLHTQRWPKPITGSLLEWIAKKTPGYAGADLQALCTQAAINALKRNFPLQKVLSLAEEKHSGWKNLSLPSFAVEERDWLEAFLHSPLPCSRREAGNATNDVVCSPLPIHLIPCLLGPLCTLLVSLDENLWLPPPLSKAVTMVKNEVVSALDKRKMPIDHWWLHIDDLLQETNIASEIKSKLMCLGILSANDGFGGSPDTADDTDDSTMKSDPSIKNHLGMRSGLFLDKSFAFTNKSGFRILISGNPRSGQRHLASCFLYCFVGSTEIQKIDMATASQEGHGDVVQGIAQILLKCASLQSCILFMPRIDLWAVNKHVQIYEKESELNTEKSSAEITEGEANKKASHAWMSFIEQVESIGVSTSLMILATSEVSYTELPSKIREFFKSYQSKDSQSTPLQQTIPRLSLHLDSNFDNETLITLSVEELLRNLVEQQIQLIHQSSHVHLGVRKVSVEACEEKVCQSKDNGSVDEEKSETQVPKSTSAPPPPPPPPDGRSLKEKSTLSLAISTFGYQILLFPHFAELCWVTSKLKEGPCADVSGPWRGGWPFNSCVIRPNNSLDKSMVPGSSGGVKSKERSGLVRGLIAVGLLAYRGVYKSAREVSLDVRKVLEILIENINAKIQAGKDRYQYLRILSQVAYLEDIVNNWAYALHSMDKDSLEPISKVMSSSDGLNSHLSCVDHQAETKDVHMNGDDSENPGRSCKEIHAETTGFPAMNKKNDNTDKLDHDGRHTNTSAKECLPNDSLNNHSDDSAAANQPVDPSPNQENGLLSREVAEGDVRMSEELGKSTSTHSAVLSENGLHTALEQEGLNGGTVSTISNQPPTLSTEETGVTDVYSRKHENATGIDISSSKGHEHAEPAVVCMYQCCPRCLHSLYLAIRKLLTSELSVNHRTVEDVHDAVSSLSVDLISAIRKCHIEDLNDFSNKTFKRERHGITLNLRTCDSKNQDKDFVAAECVTHSTSQEATATKDEVVNESLKLDLKFIFRDGVLVPMNPDKDVSLHCKFETLCLCSLRELIVMTKSPFD 1850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02053 1850 MobiDBLite consensus disorder prediction 407 441 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 1560 1593 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 185 260 - -
Adu08g02053 1850 Pfam ATPase family associated with various cellular activities (AAA) 682 817 IPR003959 GO:0005524|GO:0016887
Adu08g02053 1850 ProSiteProfiles Extended PHD (ePHD) domain profile. 418 556 IPR034732 -
Adu08g02053 1850 ProSitePatterns AAA-protein family signature. 787 805 IPR003960 GO:0005524|GO:0016887
Adu08g02053 1850 MobiDBLite consensus disorder prediction 296 377 - -
Adu08g02053 1850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 644 874 IPR027417 -
Adu08g02053 1850 Pfam PHD-like zinc-binding domain 477 556 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 297 314 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 101 119 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 1 26 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 179 260 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 1288 1325 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 1 17 - -
Adu08g02053 1850 CDD AAA 676 817 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 127 150 - -
Adu08g02053 1850 Pfam AAA+ lid domain 843 875 IPR041569 -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 315 344 - -
Adu08g02053 1850 Gene3D - 818 878 - -
Adu08g02053 1850 SMART AAA_5 678 819 IPR003593 -
Adu08g02053 1850 Gene3D - 643 817 IPR027417 -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 1544 1559 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 61 150 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 1288 1303 - -
Adu08g02053 1850 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 58 1846 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 1307 1321 - -
Adu08g02053 1850 MobiDBLite consensus disorder prediction 1533 1593 - -
Adu08g02053 1850 PANTHER AAA DOMAIN-CONTAINING 58 1846 IPR045199 -
Adu08g02053 1850 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 453 558 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02053 Adu-Chr8 34338997 34346404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02053 644 879 Calmodulin-binding Proteins AT3G56690 40.756 2.82e-45 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02053 - - ahf:112772466 3574.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02053 08 34338997 34346404 Adu08g02053 08 34338997 34346404 ECH