Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02042 ATGGACAGCTTCTACCACCACCATAACCACCACTTTGACAACAGCGACACTCACTTGCCACCTGGATTCCGATTCCACCCCACCGATGAAGAACTCATCACCTACTACCTCGTCAAGAAGGTTCTCGACAACACCTTCACCGGAAGAGCCATAGCTGAAGTTGACCTCAACAAGTGTGAGCCATGGGAGCTCCCTGAGAAAGCGAAGATGGGTGAGAAAGAATGGTACTTCTTCAGCTTAAGGGACAGGAAGTACCCAACTGGGTTGCGCACAAATAGAGCGACGGAAGCTGGGTACTGGAAAGCCACTGGAAAAGACAGAGAGATCTACAGCTCCAAGACTTGTGCTCTTGTTGGAATGAAGAAGACACTTGTTTTCTACAGAGGAAGAGCTCCCAAGGGTGAGAAGAGCAACTGGGTGATGCATGAGTATCGGCTTGAAGGCAAATTTGCATACCATTATCTCTCTAGAAGCTCCAAGGATGAGTGGGTGATTTCTCGTGTGTTCCAGAAGACAACCACCGGGGGTGGTGGTGGAGGTGGAGGTGGAGGCTCAGCCGTGTCAACCACCGCCGGCGGGTCCAAGAAGGCGAAAATGAGCACTTCCACCACTTCTACAATGAGCTTCTGCCCTGAACCAAGTTCTCCCTCTTCGGTTTACCTTCCACCACTTCTCGACTCTTCACCTTACACTACCGCCACCACCGGCTCCGTCACCTCCGCCGCCGCAGCATACGACGGCCGCCAGAGCTCCTCCTTCGACAACAACAACAACAACAACGATAGCACAAGGGAGCACGTGTCCTGTTTCTCCACAATCTCCAACAACTTTGTCAATGGGTTCTTCGATCTTGCTCCTATGGATTCCTTCGCTCGATTCCAAAGAAACAACAATGTCGGTGTTTCTGCATTCCCAAGTCTAAGGTCGCTGCAAGATAACCTTCAAATTAACCCTTTGTTTTTCTCCGCCGCAGCGGCGCAGCCTCTCCACGGCGGCGAGCTTCACGCCGCGGGGACCTGGCCGGTGCCGGATGATCAGAGGGTTGCCGAGGCTGCTGCCGCCGGCATGGCTTTGGGACATTCCGAGCTTGATTGCATGTGGGGCTATTGA 1110 0.5306 MDSFYHHHNHHFDNSDTHLPPGFRFHPTDEELITYYLVKKVLDNTFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKTTTGGGGGGGGGGSAVSTTAGGSKKAKMSTSTTSTMSFCPEPSSPSSVYLPPLLDSSPYTTATTGSVTSAAAAYDGRQSSSFDNNNNNNDSTREHVSCFSTISNNFVNGFFDLAPMDSFARFQRNNNVGVSAFPSLRSLQDNLQINPLFFSAAAAQPLHGGELHAAGTWPVPDDQRVAEAAAAGMALGHSELDCMWGY 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02042 369 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Adu08g02042 369 MobiDBLite consensus disorder prediction 187 215 - -
Adu08g02042 369 ProSiteProfiles NAC domain profile. 19 171 IPR003441 GO:0003677|GO:0006355
Adu08g02042 369 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 365 - -
Adu08g02042 369 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 10 365 - -
Adu08g02042 369 MobiDBLite consensus disorder prediction 174 215 - -
Adu08g02042 369 Gene3D NAC domain 28 175 IPR036093 GO:0003677|GO:0006355
Adu08g02042 369 SUPERFAMILY NAC domain 10 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02042 Adu-Chr8 34165818 34167836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02042 1 369 NAC Transcription Factor Family AT5G53950 52.911 2.60e-120 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu08g02042 NAM 1.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02042 - - cam:101501114 473.396