Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02040 ATGGCTGACATAGCAGGTTTACTTGAGGCAGCAGGATCAAGGTTCAGTGCATTGGAGCTTATTGGGCAGGGATCATTTGGTGATGTCTATAAAGGGTTTGACAGAGAGCTTAACAAAGAAGTTGCTATCAAAGTAATTGATTTGGAAGAATCGGAGGATGAAATTGATGATATTCAGAAGGAAATTTCTGTTCTGTCACAATGCCGATCTCCATACATCACTGAGTACTATGGTTCCTATCTCAATCAAACTAAACTCTGGATAATAATGGAATACATGGCTGGCGGCTCTGTCGCTGATCTACTTCAATCCGGTCCTCCACTGGATGAAACATCCATTGCTTGCATTCTACGTGACTTGCTACATGCAATTGATTACCTACACACTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACCGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGCTCACGAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCTTTCTGGATGGCACCAGAGGTTATTCAGAATTCCGAAGGATATAATGAGAAGGCAGATATCTGGTCTATGGGGATCACTGCAATTGAGATGGCAAAAGGGGAGCCTCCACTTGCCGATCTTCATCCCATGAGAGTGCTTTTTATCATACCTCGAGAGAATCCTCCGCAGGTTAGGCCAAGTGCTAAGGAACTTCTCAAACACCGTCTTATTCGGAATGCTAGGAAGAGTCCAAAGCTTGCAGAAAGAATAAGGGAGCGTCCAAAGTACCACATAAAGGATGATCCGGGGGCAGATGATCCGGGGACTGTTAAAAAAGTCCCAAGAGGGATAGGTGAGGCTTCTGATACTATGAAGGTGTCTAGAGATGTTAGAGCTGAAGAAACTAGTAGAACCAGTGGTCAGGGTCAAACTGTAAAAAGTGCTGGATGGGACTTCAACATTGGTGGGTCACAAGGCACTGTTCGTAGCGGTACTGTTCGTAGTGTAGCACGACCACCTGTTTCACAAAATCAGGTTACCCAAAGAAAAGCTCCGGAGAGTGGCTATCAAGGGGGAACTGTCAGTAGAAGTGCACTAAACGAGTCAGTTGAAAGTTCACTCGGAAAGGATCTTAGAGTTACATATCATGATGAGGATCCGGATGATCATCTTGAAGATGATGAAGGGAATGGATCAGGAACTGTCGTAATTCGATCTCCAAAAGCATCAAGGCCATCAGTAGTTCGTGGCCAAAGCTCCCAGTCTAGCAGCAGCTATGCTTCTCTTGAAGATGCTTCTACCAGTGGAACTGTTGTCTTGCGTAACCAGAATGATGATTCTGATTCTTCACAAACACCTAGGTCCCGCAAGGGACTTAACGACAGAAATTCTATTACTTCACTGGAAGATAGTGCTGCAAATCTTGCTGAGGCAAAGGCTGCTATCCTAAGGAAAGCAAATGCTAAAGAGAGAAAATTCAACAATATACAAGAAAGCAAGAGAGACCAAATGGCAGGCAGTTCTGATTCTTCAAGATCACATCATGAATACCATGATCCTCAAAAGGGCATGTCAAGATCACAATATGCCAGTGATGATGAAGAGAGTGCTAAAGTTATGTCATCCTCTGTGCCATTATCAGTTTTGCTCGCTCCTTCACTAAAAGAGACCATTGCTAATGATCCAGAAGGGGCAATTGTGCGAGCGGTTATCAGTTCTCTCGTAAACATGGAGGGCACAAGGCCAAGATCCTGCGATGTTCTTGTCAGAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAGGAAGATTCATTGAAGGACCTGCAGGAACTAGCAGGCCAACTATTCAGCAAGACCAAGGGAGCCGGAGACACACGAAACACCGAAGCCGATAGCCGGAGGAAACAACAGAACAAGGACATCCATCAAAATAGCAATTTGAGCCCACTAGCCAGATTTCTTCTCTCAAGATGGCAGGGTCAAAGCTCACGTGATCTAAACCAATCTTAA 2010 0.4423 MADIAGLLEAAGSRFSALELIGQGSFGDVYKGFDRELNKEVAIKVIDLEESEDEIDDIQKEISVLSQCRSPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDETSIACILRDLLHAIDYLHTEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSMGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQVRPSAKELLKHRLIRNARKSPKLAERIRERPKYHIKDDPGADDPGTVKKVPRGIGEASDTMKVSRDVRAEETSRTSGQGQTVKSAGWDFNIGGSQGTVRSGTVRSVARPPVSQNQVTQRKAPESGYQGGTVSRSALNESVESSLGKDLRVTYHDEDPDDHLEDDEGNGSGTVVIRSPKASRPSVVRGQSSQSSSSYASLEDASTSGTVVLRNQNDDSDSSQTPRSRKGLNDRNSITSLEDSAANLAEAKAAILRKANAKERKFNNIQESKRDQMAGSSDSSRSHHEYHDPQKGMSRSQYASDDEESAKVMSSSVPLSVLLAPSLKETIANDPEGAIVRAVISSLVNMEGTRPRSCDVLVRKLLQRLASSKEDSLKDLQELAGQLFSKTKGAGDTRNTEADSRRKQQNKDIHQNSNLSPLARFLLSRWQGQSSRDLNQS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02040 669 MobiDBLite consensus disorder prediction 413 465 - -
Adu08g02040 669 MobiDBLite consensus disorder prediction 251 465 - -
Adu08g02040 669 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 232 - -
Adu08g02040 669 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 230 667 - -
Adu08g02040 669 Gene3D Transferase(Phosphotransferase) domain 1 12 280 - -
Adu08g02040 669 Coils Coil 591 611 - -
Adu08g02040 669 SMART serkin_6 15 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02040 669 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Adu08g02040 669 MobiDBLite consensus disorder prediction 506 534 - -
Adu08g02040 669 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 232 - -
Adu08g02040 669 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 230 667 - -
Adu08g02040 669 MobiDBLite consensus disorder prediction 624 640 - -
Adu08g02040 669 CDD STKc_MST3_like 13 264 - -
Adu08g02040 669 MobiDBLite consensus disorder prediction 304 372 - -
Adu08g02040 669 SUPERFAMILY Protein kinase-like (PK-like) 12 246 IPR011009 -
Adu08g02040 669 MobiDBLite consensus disorder prediction 618 643 - -
Adu08g02040 669 MobiDBLite consensus disorder prediction 493 539 - -
Adu08g02040 669 ProSiteProfiles Protein kinase domain profile. 15 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02040 669 Pfam Protein kinase domain 16 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02040 669 MobiDBLite consensus disorder prediction 251 276 - -
Adu08g02040 669 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02040 Adu-Chr8 34141275 34148673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02040 1 666 MAP Kinase Kinase Kinase Kinase AT3G15220 59.322 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Adu08g02040 Pkinase 7.9e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02040 K08838 - gmx:100815042 979.548