Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02020 ATGTGTTGTTGTTCTTGGTGTACATGCATCTCTAACTGGATAAAGATGGAAGGTTCTTCAGGTTCTGCCTGGCAGAAATCTGATAGCTCGAGGACGTTGAATAGTTCCGGAGTCTCTGATAGGAACCAAAGGCATCGTTGTCCTGAAAGAAATCGCTTATCTGGTGAGGCTTCACACGATTCGAGCTCAAAGAAGGAAAGGGACAGGGTTCTTTTGGCACAAGGTGATCACAATAAGAATCTGGGTGGGTTTTCTGGGTTTTGTGATGACGAAGTAGGGGCGGACCCTTTTGTTTGCTCTATAGAATGGGGTGATATTAGCCTGAGGCAATGGTTAGATAAACCGGATCGATCCGTAGATGTCTTTGAATGTTTGCACATATTTAGGCAAATAGTAGAAATTGTTAACTTAGCACATTCTCAAGGAGTTGTAGTTCATAATGTCAGGCCTTCCTGCTTTGTCATGTCGTCTTTCAACCACATCTCATTTATTGAATCTGCATCTTGTTCGGATTCTGGATCAGATTCTTTAGGAGATGGATTGAATGGCCAAGGTGTTGAGGTTAAAACTCCAATGTCTCTCTGCCCCCACGACATGCATCATCGGAGTTTAGGAAGTGAAGATTTTGTGCCTGTCAAACCCTCAACAACTGCTTTGTCAGATTCTAGTTGCATGCTGTCGAGTGCAGTGTATGCAGCTCGTGCGTCGTTAATAGAAGAAACAGAAGAAAATAAAATGAAGGATAGGAGAAAGGCCGAAGAAGTAGAAGGAAAGAAGCAATCATTTCCAATGAAACAGATACTATTGATGGAGATGAGTTGGTATACTAGTCCCGAAGAGGCTTCGGGCAGTCCTAGTTCCTGTGCTTCAGATGTTTACCGCTTGGGGGTTCTCCTTTTTGAGCTATTCTGTCCACTGAGCTCAAGAGAAGAGAAGAGTAGAACCATGTCTAGCCTTCGACACAGAGTTCTTCCTCCGCAGTTACTTCTAAAGTGGCCTAAAGAAGCCTCCTTTTGCTTACTGTTACTACATCCTGAGCCTAGCAGTCGTCCAACATTGGGGGAGTTGCTGCAGAGCGATTTCCTCAATGAACAGAGAGATGACATGGAAGAACGTGAAGCGGCAATAGAACTTCGACACAGAATAGAGGATCAGGACTTGTTACTAGAATTCCTTTTGTTAATTCAACAAAGAAAACGGGAAGTAGCTGAGAAGTTGCAACACACTATCTCATTTCTGTGTTCAGATATTGAAGAAGTTGCCAAGAAGCAAGGCAGACTTAAAGAGATTACCGGAGCCGAACTAGGGTGTGATAATCATTCAACATCAAGTTTCCCATCCATGACTGTTGTTGATAGTGAGGATTCTGCTTGCACGGGGACCAGAAAACGATTTAGACCAGGGATGCATGTTAGAAACATGGAGGAATATGATGATAACATAGTTGATGATCACAAAAATCAGGGAAGTTATCTTTCGAAAAGCTCACGGCTGATGAGGAACTTTAAGAAACTAGAATCAGCATACTTCTTAACACGTTGCCGACCATCGTTGGCGAGACCAGTGGCTAGACATTTGCCTTTAGCAAACGATGGTAGAGGTTCTGTTGTTGTGTCTGAAAGAAGTTGTGTCAACAACTTAGCATCAAAAGAGCAATGCAGGGAGGGTTCAAGTGCTTGGATAAATCCTTTCCTTGAGGGTTTATGCAAGTACTTATCTTTCAGTAAGCTAAAGGTTAAGGCTGACCTTAAGCAAGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCACTCAGCTTCGATCGTGATGGAGAATTTTTCGCTACTGCTGGCGTGAATAAGAAAATCAAAGTGTTTGAATGTGATGCAATCATAAATGAGGATCGTGATATCCACTATCCGGTGGTGGAGATGGCTAGTAGGTCAAAGCTGAGCAGCATATCTTGGAATACTTACATCAAAAGTCAAATTGCTTCGAGTAACTTCGAAGGGGTTGTACAGTTATGGGATGTGACAAGAAGTCAAGTACTGTCCGAAATGCGGGAGCATGAGCGGCGGGTGTGGTCGATCGATTTCTCATCAGCAGACCCGACAATGTTGGCAAGTGGGAGCGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAGGCAATTCCATTCTTGCACTTGGGAGTTAGTATCGGTACCATCAAGACGAAGGCAAATGTGTGCTGCGTTCAGTTCCCTCTGGATTCAGCTCGCTTCCTCGCATTTGGTTCGGCAGATCACCGGATATACTACTATGATCTTCGCAACTTGAAAGTGCCGCTTTGTACATTGATTGGACATAGTAAGACTGTGAGCTACATCAAGTTTGTAGACAATGTGACTCTTGCCTCTGCATCCACGGATAACACACTTAAGCTTTGGGATTTGTCTACATGCGCGTCTCGAGTCATCGACTCGCCTGTTCAATCATTCACCGGTCATATGAATGTTAAGGTATGTTCATTGATAAGACTAACTTTATTCCCTCTGAGTTCATATGTTATCTTGCTGAAGTATCTTTCCTTGTTGCAGAACTTTGTGGGGTTATCAGTTTCCGACGGTTATATAGCCACCGGTTCAGAGACAAATGAGGTGTTCATATACCACAAGGCCTTTCCCATGCCAGCATTATCATTCAAGTTTCAGAACACCGACCCCCTTTCTGGCCATGAAGTCGAAGATGCCACACAGTTTGTCTCTTCGGTATGTTGGCGCGGCCAGTCCTCCACCTTACTCGCCGCGAATTCGACTGGGAATGTCAAGATTCTGGAGATGGTTTGA 2808 0.4395 MCCCSWCTCISNWIKMEGSSGSAWQKSDSSRTLNSSGVSDRNQRHRCPERNRLSGEASHDSSSKKERDRVLLAQGDHNKNLGGFSGFCDDEVGADPFVCSIEWGDISLRQWLDKPDRSVDVFECLHIFRQIVEIVNLAHSQGVVVHNVRPSCFVMSSFNHISFIESASCSDSGSDSLGDGLNGQGVEVKTPMSLCPHDMHHRSLGSEDFVPVKPSTTALSDSSCMLSSAVYAARASLIEETEENKMKDRRKAEEVEGKKQSFPMKQILLMEMSWYTSPEEASGSPSSCASDVYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLLLLHPEPSSRPTLGELLQSDFLNEQRDDMEEREAAIELRHRIEDQDLLLEFLLLIQQRKREVAEKLQHTISFLCSDIEEVAKKQGRLKEITGAELGCDNHSTSSFPSMTVVDSEDSACTGTRKRFRPGMHVRNMEEYDDNIVDDHKNQGSYLSKSSRLMRNFKKLESAYFLTRCRPSLARPVARHLPLANDGRGSVVVSERSCVNNLASKEQCREGSSAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDAIINEDRDIHYPVVEMASRSKLSSISWNTYIKSQIASSNFEGVVQLWDVTRSQVLSEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQAIPFLHLGVSIGTIKTKANVCCVQFPLDSARFLAFGSADHRIYYYDLRNLKVPLCTLIGHSKTVSYIKFVDNVTLASASTDNTLKLWDLSTCASRVIDSPVQSFTGHMNVKVCSLIRLTLFPLSSYVILLKYLSLLQNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALSFKFQNTDPLSGHEVEDATQFVSSVCWRGQSSTLLAANSTGNVKILEMV 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02020 935 Coils Coil 238 258 - -
Adu08g02020 935 PANTHER PROTEIN SPA1-RELATED 3 853 935 - -
Adu08g02020 935 PANTHER PROTEIN SPA1-RELATED 2 853 935 IPR044630 GO:0009640
Adu08g02020 935 ProSiteProfiles Trp-Asp (WD) repeats profile. 680 715 IPR001680 GO:0005515
Adu08g02020 935 PANTHER PROTEIN SPA1-RELATED 3 16 827 - -
Adu08g02020 935 Pfam WD domain, G-beta repeat 676 713 IPR001680 GO:0005515
Adu08g02020 935 Pfam WD domain, G-beta repeat 769 804 IPR001680 GO:0005515
Adu08g02020 935 Pfam WD domain, G-beta repeat 590 619 IPR001680 GO:0005515
Adu08g02020 935 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 680 715 - -
Adu08g02020 935 Gene3D Transferase(Phosphotransferase) domain 1 105 374 - -
Adu08g02020 935 SUPERFAMILY WD40 repeat-like 590 932 IPR036322 GO:0005515
Adu08g02020 935 ProSitePatterns Trp-Asp (WD) repeats signature. 791 805 IPR019775 -
Adu08g02020 935 ProSiteProfiles Protein kinase domain profile. 1 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02020 935 MobiDBLite consensus disorder prediction 42 68 - -
Adu08g02020 935 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 773 807 - -
Adu08g02020 935 SMART WD40_4 723 762 IPR001680 GO:0005515
Adu08g02020 935 SMART WD40_4 766 804 IPR001680 GO:0005515
Adu08g02020 935 SMART WD40_4 889 933 IPR001680 GO:0005515
Adu08g02020 935 SMART WD40_4 585 620 IPR001680 GO:0005515
Adu08g02020 935 SMART WD40_4 631 670 IPR001680 GO:0005515
Adu08g02020 935 SMART WD40_4 673 713 IPR001680 GO:0005515
Adu08g02020 935 Gene3D - 849 935 IPR015943 GO:0005515
Adu08g02020 935 Gene3D - 566 838 IPR015943 GO:0005515
Adu08g02020 935 SMART serkin_6 13 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02020 935 MobiDBLite consensus disorder prediction 22 68 - -
Adu08g02020 935 MobiDBLite consensus disorder prediction 22 41 - -
Adu08g02020 935 PRINTS G protein beta WD-40 repeat signature 791 805 IPR020472 -
Adu08g02020 935 PRINTS G protein beta WD-40 repeat signature 657 671 IPR020472 -
Adu08g02020 935 PRINTS G protein beta WD-40 repeat signature 700 714 IPR020472 -
Adu08g02020 935 ProSiteProfiles Trp-Asp (WD) repeats profile. 773 807 IPR001680 GO:0005515
Adu08g02020 935 PANTHER PROTEIN SPA1-RELATED 2 16 827 IPR044630 GO:0009640
Adu08g02020 935 SUPERFAMILY Protein kinase-like (PK-like) 72 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02020 Adu-Chr8 33757396 33762231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02020 657 807 Miscellaneous Gene Families AT5G08390 26.923 4.09e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Adu08g02020 WD40 0.00011 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02020 - - gmx:100811457 1521.52