LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g02007	ATGGCGGGGAAATCTCTAACCGGGTTTTGCTTCATCCTCCTCCTCCTCGTTGTTGCTCAGGAAATGGTGGTGCAAAGTGAGGCAGCAACGTGTGAGAACCTGGCGGATACCTACAGGGGACCATGCTTCACCACCGGAAGCTGCGACGACCACTGCAAGAACAAGGAGCACCTGCTCAGCGGCCGCTGCCGCGACGATTTCCGCTGTTGGTGCACCAGAAACTGTTAA	228	0.5658	MAGKSLTGFCFILLLLVVAQEMVVQSEAATCENLADTYRGPCFTTGSCDDHCKNKEHLLSGRCRDDFRCWCTRNC	75

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g02007	75	PANTHER	DEFENSIN	1	75	-	-
	Adu08g02007	75	PANTHER	DEFENSIN-LIKE PROTEIN 1	1	75	-	-
	Adu08g02007	75	SMART	gth_4	30	75	IPR003614	GO:0006952
	Adu08g02007	75	SUPERFAMILY	Scorpion toxin-like	30	75	IPR036574	-
	Adu08g02007	75	Pfam	Gamma-thionin family	30	75	-	-
	Adu08g02007	75	ProSitePatterns	Gamma-thionins family signature.	29	52	IPR008176	GO:0006952
	Adu08g02007	75	Gene3D	-	29	75	IPR036574	-

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g02007	Adu-Chr8	33551452	33552508	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu08g02007	11	75	Plant Defensins Gene Families	AT2G02130	38.806	3.00e-09	47.0

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g02007	-		K20670	gmx:100779239	144.05

Showing 1 to 1 of 1 entries