Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01981 ATGGAACGAGAGATGGTGGACATTGAATCTCAAACTAATCATCAAGAAGTGCCTAACAATGTCTTCCACAAGAGAAAAACTCCGGTGACTCTCAAGTTTGAAGATGTTGTGTACAAAATCAAGATTGAGAATGGTGGAATATTGGAGAAGAAGAAAAAGGCATCAGAACGCAAAGTGATATTGAATGGAGTATCAGGAATTGTTCAACCGGGTGAGATCCTTGCAATGTTAGGTCCGTCAGGAAGTGGCAAGACAACACTGCTGACTGCATTGGGCGGCCGTCTCGGCGGCCGCCTCAAAGGAAAGATAACATACAATGGAGACCCCTTCAGCAATGCCATGAAGAGGAACACCGGCTTCGTCACGCAAGACGATGTCCTTCACCCTCATTTGACAGTAACTGAGACCCTTGTTTTCACCGCTCTCCTCCGCCTACCTAACACGGTAGCCAAGGAGGAGAAGGTGGCATTGGCAAAAGCCGTGATGAACCAACTTGGATTGGTCAAGTGTAAAGACAGTATTGTTGGAGGCCCCGGTCTACGAGGGGTTTCCGGTGGAGAAAGAAAAAGGGTTAGTGTTGGTCAAGAATTGCTCATAAACCCTAGTTTGTTGTTTCTTGATGAACCAACCTCGGGTTTGGATTCAACTACCGCATTAAGACTTGTGTCAACTTTGTTTGAGCTTGCAAGAGGAGGAAGAACTATTGTGATGACAATACACCAACCTTCTAGTAGGTTGTACTATATGTTCACTAAGGTGTTGCTCCTTTCAGAAGGGAACACTGTTTATTTTGGAAAGGGTTTGGAGGCATTGGATTATTTCTCTAGTGTTGGATTTTCTCCAGCATTAGCCATGAACCCTGCTGATTTCCTTTTGGATCTTGCTAATGGGATATACACCAACGAATTGAACGAGGATGTTGTGGTGGACAAACAACAATTGATTCAGGCATACAAGAGCTGTAACGCTGATTCCCAATTGAGGCAAATGGTTCAAGAAACGAATAGCAACTCATCAAGTAGAGTTGAGAACACAGCAGGGTTTGGAAAATGGCCTACAAATTGGTGGCAACAATTCACGGTGTTGTTGAGAAGAGACCTTAAAGAGAGAAAGCACGAAGCATTCGCTTCCTTCAATATTGTTCAGGTCGTCTTGACTTCTTTCATTGTAGGACTATTGTGGTACAAGTCTGATACCGCACACATGCAAGATCAGCTTGGACTTCTATTCTTCTTATCAAGTTTCTGGTCATTTTATCCGCTGTACAGAGCAATCTTCGTGTTCCCAGATGAAAGAGTGATGTTGGAGAAAGAAAGATCTTCCGGAATGTACAGACTATCCTCATACTTCATGGCCAAGATGACGGTAGACCTTCCAATGGAACTCGTCCTCCCAACCGTTTCCATTCTCATAACCTACTGGATGGCAGCTCTGAAAGCTACCGCCGCCGCCTTCATCTTCATGCTCCTCACTATCCTCACCCTTGTGTTGGTCTCCCAAGGCATAGGACTCGCTCTCGGCGCCTGTGTCCAGAACACCAAAGTCGCCACCACCTTCGCCTCCGTCATAGGGCTAACCTTCATGATAACAAGTGGATTCTTTGTCCAGAATGTTCCCAAATTCATAGCATGGTTGAAGTACCTTTCTTTCATATATTACGCCAACGAACTCGTTATATTTTCTCAGTATCGTGAAGGTGAGACTTACAAATGTGGTAAGGGTAAGTGCTTGATTTATGAGTACCCTGGAATCAAGGGTTTAGGGTTCGTTAATAATAGAGAGAGTCAATTAAGGGCTTCATTGATTTTGCTAGCAATGCTGTTTTTCTATAGGTTTATAGCTTATGTTGCTCTTATGAGAATTGGAGTCACAAAGAAATCCAAGTCTAGCTAG 1893 0.44 MEREMVDIESQTNHQEVPNNVFHKRKTPVTLKFEDVVYKIKIENGGILEKKKKASERKVILNGVSGIVQPGEILAMLGPSGSGKTTLLTALGGRLGGRLKGKITYNGDPFSNAMKRNTGFVTQDDVLHPHLTVTETLVFTALLRLPNTVAKEEKVALAKAVMNQLGLVKCKDSIVGGPGLRGVSGGERKRVSVGQELLINPSLLFLDEPTSGLDSTTALRLVSTLFELARGGRTIVMTIHQPSSRLYYMFTKVLLLSEGNTVYFGKGLEALDYFSSVGFSPALAMNPADFLLDLANGIYTNELNEDVVVDKQQLIQAYKSCNADSQLRQMVQETNSNSSSRVENTAGFGKWPTNWWQQFTVLLRRDLKERKHEAFASFNIVQVVLTSFIVGLLWYKSDTAHMQDQLGLLFFLSSFWSFYPLYRAIFVFPDERVMLEKERSSGMYRLSSYFMAKMTVDLPMELVLPTVSILITYWMAALKATAAAFIFMLLTILTLVLVSQGIGLALGACVQNTKVATTFASVIGLTFMITSGFFVQNVPKFIAWLKYLSFIYYANELVIFSQYREGETYKCGKGKCLIYEYPGIKGLGFVNNRESQLRASLILLAMLFFYRFIAYVALMRIGVTKKSKSS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01981 630 SMART AAA_5 70 260 IPR003593 -
Adu08g01981 630 Pfam ABC-2 type transporter 240 341 IPR043926 GO:0140359
Adu08g01981 630 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 622 - -
Adu08g01981 630 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Adu08g01981 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 275 IPR027417 -
Adu08g01981 630 Pfam ABC transporter 61 211 IPR003439 GO:0005524
Adu08g01981 630 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 13 622 - -
Adu08g01981 630 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 283 IPR003439 GO:0005524
Adu08g01981 630 Pfam ABC-2 type transporter 357 562 IPR013525 GO:0016020|GO:0140359
Adu08g01981 630 Gene3D - 48 276 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01981 Adu-Chr8 33068711 33072749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01981 60 244 Calmodulin-binding Proteins AT2G36910 30.890 9.26e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01981 K05681 - gmx:100816135 770.77