Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01976 ATGGAGAGCACCGACTCGTCCACCGGTTCGCAACAACCGAACCTTCCACCGGGTTTCCGGTTCCACCCCACCGACGAGGAGCTCGTTGTTCACTACCTGAAGAAGAAAGCTGCATCAGCTCCTCTCCCAGTCGCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCAGCTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTCTTTAGCCCAAGGGACAGGAAGTATCCGAACGGTGCTCGGCCAAACAGGGCGGCAACTTCCGGGTACTGGAAGGCAACCGGGACGGATAAGCCGGTGCTGACCTCCGGTGGGACCCAGAAGGTCGGCGTGAAGAAGGCTTTGGTCTTCTATGGAGGGAAGCCCCCCAGAGGGATAAAGACAAATTGGATCATGCATGAGTATAGACTTGCTGATAACAAACCTAACAATAGGCCTCCTGGTTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTATTGTGCCGAATCTACAAGAAGAACAACACACATAGGTCTCCAATGGAACATGAGAGGGAAGATTCCATGGATGACATGATTGGAGGGATTCCTCCTTCCATCAACGTGGGCCAAATGAATGCAAGATTTCATCTCTCAAAAATGTCAACAAGCTTTAGCAACGCTTTGTTGGAAAACGACCATCACCATCACCAGAATCTTCTGGAAGGTATGATGCTAGGAGGAGGAACCAACAACAGCAATCCAAACATGTTGGGATTGGGATCAGCCTCAAACACCATTAACAATAATAGTAATAAGGCAGAGCTTTCATTTGTACCAACCATGACTACATCTTCAAACACCAAGAGGACTCTATCATCACTCTATTGGAATGAAGATGATGTTGCTGCTTCCAACAAAAGATTCAATTTGGAAAGTGGAGATCATAACCATGGAGAGAATAATGGTACTAGTGCTAGTTCTATTGCTACTCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACACAACATCATGGGAACAATACCTTATCAAATTCAAGGAATGA 1092 0.446 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPMEHEREDSMDDMIGGIPPSINVGQMNARFHLSKMSTSFSNALLENDHHHHQNLLEGMMLGGGTNNSNPNMLGLGSASNTINNNSNKAELSFVPTMTTSSNTKRTLSSLYWNEDDVAASNKRFNLESGDHNHGENNGTSASSIATLXXXXXXXXXXXXXXXXXXXXXNTTSWEQYLIKFKE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01976 363 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Adu08g01976 363 Coils Coil 350 350 - -
Adu08g01976 363 MobiDBLite consensus disorder prediction 304 324 - -
Adu08g01976 363 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 340 - -
Adu08g01976 363 MobiDBLite consensus disorder prediction 239 261 - -
Adu08g01976 363 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Adu08g01976 363 MobiDBLite consensus disorder prediction 241 261 - -
Adu08g01976 363 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Adu08g01976 363 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Adu08g01976 363 Coils Coil 325 328 - -
Adu08g01976 363 MobiDBLite consensus disorder prediction 1 22 - -
Adu08g01976 363 MobiDBLite consensus disorder prediction 1 17 - -
Adu08g01976 363 PANTHER NAC TRANSCRIPTION FACTOR 56 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01976 Adu-Chr8 32923693 32925430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01976 1 306 NAC Transcription Factor Family AT3G15510 58.537 1.49e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu08g01976 NAM 9.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01976 - - vra:106763825 538.88