Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01949 ATGGCTGCTTTAGATTTAAATGGAGATTTCAACAACACCCTCATCTGCTGCTTTTACTGCAAGTCGGTGTCCACACCCTTCAGATATGGCTGGCCCCTTGGCGATGGCACTTTGGCACAACTCTGTCGTCAATGCGGGCATCTCTACGATAGTGGAGCATTTTGTACCACATTTCACGCTGGACTTGCCGGGTGGAAAGCATGTTTAATCTGCAAAAAGTATCTGCATTGTGGATGCATTGTGTCTGAGAAGGATATTTTCGTGATGAATTTTGGTGGAGGTGTTTGTTGCTTAGTTTGTGCAAAGAAATATCTTCTTCCCGCTGAGGATGAAATTGATGAACACAAGCCCGTGAATGATTGTCCTCCTGTATTAACGTGGAACAATTCCAGTGCTAATCAATCCATGGACCGTCCTTCCAATGAAACCAAAACACGGAGAAATTCAACCATGGCTGCTGCTCCAAATGAATCAACTCATCAAATGGTTATATCTGGAGCAAAATGCAAACAGAAACATGCAGTATCAGGAGGTGGTTCATCATCAACAGCCATGATTAATGCATCATTATCATTGAGTGAAAACAATGGCACACAACCTAATAATTCTGGGTGTTGCTTATATGTTTCACCTCAAACTGGTTTGATCCGTTTCCTCAATTTTGGTCAGATGAAACAGCAGCAATATTTGAAAGATTTGGGATTTCCCAATTCTACAATGACTCCTATGTTCAAGAAAATTCTAAGTGCAACTGATACTAAAGTCAAGAGTGGACGTCTTGTGATTCCAACCAAAGGCGCAAGGGCTTATCTTCCAGAACTTGAGGATAAGCAACGATGCATTCTCCTTGAAATTCTTGACACCAAAGGGAATATTTGGAAGTTAAGCTACCGTTTTTGGGAGAACAACAGAGGGAGGATCTATGTTCTTGGAGGCCTTAAAGCTTATATTACTATTTGGAAATGGCAAGTTGGTGACCAAGTCACATTTTATCGAATTGAACCAGAAAATAAATATCTTATTGTAACTGAAAAAGAGCTTCCAGTATCTGAAAAGAAACTTCCAGCATCGTCGTCTTAA 1080 0.4074 MAALDLNGDFNNTLICCFYCKSVSTPFRYGWPLGDGTLAQLCRQCGHLYDSGAFCTTFHAGLAGWKACLICKKYLHCGCIVSEKDIFVMNFGGGVCCLVCAKKYLLPAEDEIDEHKPVNDCPPVLTWNNSSANQSMDRPSNETKTRRNSTMAAAPNESTHQMVISGAKCKQKHAVSGGGSSSTAMINASLSLSENNGTQPNNSGCCLYVSPQTGLIRFLNFGQMKQQQYLKDLGFPNSTMTPMFKKILSATDTKVKSGRLVIPTKGARAYLPELEDKQRCILLEILDTKGNIWKLSYRFWENNRGRIYVLGGLKAYITIWKWQVGDQVTFYRIEPENKYLIVTEKELPVSEKKLPASSS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01949 359 CDD B3_DNA 242 341 IPR003340 GO:0003677
Adu08g01949 359 SMART B3_2 244 346 IPR003340 GO:0003677
Adu08g01949 359 SUPERFAMILY DNA-binding pseudobarrel domain 241 343 IPR015300 -
Adu08g01949 359 Pfam B3 DNA binding domain 252 338 IPR003340 GO:0003677
Adu08g01949 359 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 17 350 - -
Adu08g01949 359 MobiDBLite consensus disorder prediction 129 157 - -
Adu08g01949 359 Gene3D - 222 347 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01949 Adu-Chr8 32556400 32563381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01949 237 341 B3 DNA Binding Superfamily AT4G21550 43.810 4.39e-22 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu08g01949 B3 1.5e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01949 - - ahf:112769742 417.927