Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01945 ATGATGACCCCAAGATCTCAGGCGAGGAGCTCGCTGGAGGAGATGCTTGAGTCTCTCCGGCGGAGGGATGAGGAGGAGAAGCCGAAGGACAAGCCGCCGGCATTGCCATCGCGGCCGCCCTCGAGGGCGAGGCTGCCATCGGTGAGAGTGCCTAATAGGTTCCTTTGCCATGGAGATGATGAGAAAGAGGATAGTGGTGTTCGTGGACGCCACAGGAGGAATGGTAGTTTTGGGGTCAAGAAGGTGAAGGTGGTTGTGGAATCACCTTACATTGTGAAATCAGAAGATAGCAACTTGAACTTGAGTGCTGAAGAATCACCACCACCAACAACAACATCGTCCCCTGTATCATCACAGGTTCAGGTTCCAAACTCTGCTGTTGTGGATTTGGAGGATGATAATATTGCTTATTTCATCAGAAAGAAACTTCAAGTTTGGTGTAGGCAACAAAAGGGGAACTGGGAACTAGGAAAGATACAGTCAACTTCAGAAGAGGAAGCATGCGTTTCGCTTTCAAACGGAAATGTTATGAAAGTGTCCAGATTAGCACTCCTACCGGCTAATCCCGACATTTTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAACCCTCAGTTCTTTACAATCTTAAGAGTCGTTACACTCAAGATTTGATTTACAGCAAGGCAGGGCCAGTTTTAATTGCACTCAATCCCTTCAAAGATGTCCAGATTTATGGAAGTGAATACGTAGAAGCTTATAAACAGAGATGTAATGATAATCCTCATGTTTATGCTGTGGCAGATGCAGCTTATAACGAGATGATAAGAGGTGGTGGTGAGAGTGGAGCAGGGAAGACGGAGACAGCGAAAATTGCTATGCAGTATTTAGCTGATCTAGGTGGTGGCAGTTGTGGGATAGAAAATGATGTTCTTCAGACAAATTTTGTACTAGAATCTTTTGGAAACGCAAAAACTTCTAGGAATGATAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCGCACTGGGGAAAATTTGTGGGGCTAAAATTCAAACATGTAAGAATTTTCAATCAAGAGTTGTTCAACTAGCCAATGGTGAGAGGTCATACCACATATTTTATCAGCTTTGTGCTGGTGCTTCACCTGATCTTAGAGATAGGCTGAAGCTTAGAACGGCCAGTGAATATAGATATCTTAATCAGAGTGACTGCATGACAATTGATGGTGTTAATGATGATAAAAAGTTTCAAGGGCTAGTGAAAGCGTTGGATGTTATTCGAATGTCCAAACAGGATCAAGAAAGGGTTTTCAAGTTGCTAGCTGCAATATTATGGCTGGGAAATATTACATTCCATGAAACTGACAATGAAAATCACATTGAGGTGGTTGATGATGAAGCTGCAACCATTGCTGCCACACTGATGCAATGCAGTTTGAAGGAGCTAATGGTAACATTGTCTACCCATAAAATTAAAGCTGGCAAGGATACTATTACCAAAAAATTGACATTGCGACAGGCCATTGATACAAGAGATGCATTAGCAAAATTTATGTATGCAAACTTGTTTGACTGGCTTGTAGAACAAGTCAACAAGGCGCTTGAAGTGGGTAAACGACGTACTGGAAGATCCATAAGTATCCTTGACATTTACGGTTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGTATAAATTATGCCAATGAAAGGCTTCAGCAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTAGATGGTGTAGATTGGACAAAAGTGGAGTTTGAGGATAATCAAGTTTGTTTGGATCTCTTCGAGAAGAAGCCTCTGGGGCTGCTCTCTCTGTTGGACGAGGAATCAAATTTCCCAAGGGCCACTGATCTGACACTTGCTACTAAACTCAAGCAGCACCTGAGTTCCAATCCTTGTTTCAAAGGAGAAAGTGGCAAGGCTTTCAGTGTTCGGCATTATGCAGGGGAGGTCACATATGATACAAATGGGTTTCTGGAGAAGAACAGAGATCCACTGCCATCTGATTCCATTAAATTGTTGTCATCGTGCAGTTGCGAACTGCTGCAGTCATTCTCCCAAGTTCTTGACCCGTCTCAACAAACAAATTCATCACACTTAGGTGCTATGGAGTCAAAAAGGCAGAGTGTTGGCACAAAGTTCAAGGGTCAGCTGTTTAAGTTGATGCATCAGATGGAGAGCACCACACCCCACTTTATTCGCTGTATAAAGCCCAATGCTAAGCAAGTTCCTGGCATATATGATGAAGACCTTGTCCTGCAACAGCTCAAATGTTGCGGAGTTTTGGAGGTTGTAAGGATTTCGAGGGCTGGATATCCTACTCGAATGACGCATCAAGAGTTTGCCAAACGGTATGGGTTATTGCTTTCTGAGGCGCACACATCTTTAGATCCACTGAGTATCTCTATTGCTATTTTGCAACAATTTAATATCCCTCCAGAAATGTACCAAGTTGGCTACACCAAACTGTATCTTCGATCAGGACAGGTTGGTGTACTGGAGGATAGGAGAAAACATATTTTATGGGGAATACTTAGTGTTCAGAGAAGTTTTCGCGGTTATCAAGTCCGCAGTATTTTCCGTGAACTTAAGAATCGTGCAACAACTTTACAATCATTTATTCGTGGAGAAATTGCGAGAAAGAAATATGGTGTTATGATGGAGTCCTCTATAACCATTTCTTCTGAACATGATCAGCAGATTGAGGCAGCCATAGTAATACAATCTGTAATTCGTGGGTGGTTGGTTCGGAGGCATGCTAGTAGCCTTTATAGGCCGAAGAAACATCATGAAAATCCGAGACATAGACGAAGATCACGTCCAAAGTTTCCAGAAATACAGGATGTGTTGTCCAGAGAACTGGCTCAGAACCTGCCTTCAGCTTTAGCAGAACTCCAAAAGCGGGTCGTCAAGGCTGAAGTAACTATAGAGCAAAGAGAAGTCGAAAATTCTCAATTGAGGGATCAACTAAAACAGTTTGAGAGAAGGTGGATCGAGTACGAGAATAAGATGAAATCAATGGAGGAGATGTGGCAAAGACAAATGGTGTCTCTGCAAATGAGTCTTGCTGCTGCTAGAAAGAGCCTTGCCTCTGCCAGTGGTCAACATGCAAAACATGATGCTCTGGCGCAATATGGCTCCGATTCTGAAGATACCACTTCCATGGAATCTAGAACACCTCGAACACCTGGAGTGAGTACACCCTTGAAGTATTCGTGTAGTCTTTCTGAACTCGGAGCAGTAAGAGAAGTTAACAGTTGTGCAAATTCTGTGAGCAGTCTGGCAAGGGAATTCGAGCAGCAGAGACACGTCTTTGATGAAGAGGCCAAAGCTATGCTTGAGGGTCAAAACGGTAACATGAAATGTTATGCTGAATATAAGAAACTTAAACGTAGGTTTGAGGGGTGGAAGAAAGAATACAAGATTAGATTGAAGGAGATAAAAGCAAAAGTTCATAGGAATCCAGAAATGGATAGAGGGCGGCGAAAATGGTGGGGGAAATTGAGTTCAAAAGCACATAGTCTTGGTAGGGAATGA 3585 0.4265 MMTPRSQARSSLEEMLESLRRRDEEEKPKDKPPALPSRPPSRARLPSVRVPNRFLCHGDDEKEDSGVRGRHRRNGSFGVKKVKVVVESPYIVKSEDSNLNLSAEESPPPTTTSSPVSSQVQVPNSAVVDLEDDNIAYFIRKKLQVWCRQQKGNWELGKIQSTSEEEACVSLSNGNVMKVSRLALLPANPDILEGVDDLIQLSYLNEPSVLYNLKSRYTQDLIYSKAGPVLIALNPFKDVQIYGSEYVEAYKQRCNDNPHVYAVADAAYNEMIRGGGESGAGKTETAKIAMQYLADLGGGSCGIENDVLQTNFVLESFGNAKTSRNDNSSRFGKLIEIHFSALGKICGAKIQTCKNFQSRVVQLANGERSYHIFYQLCAGASPDLRDRLKLRTASEYRYLNQSDCMTIDGVNDDKKFQGLVKALDVIRMSKQDQERVFKLLAAILWLGNITFHETDNENHIEVVDDEAATIAATLMQCSLKELMVTLSTHKIKAGKDTITKKLTLRQAIDTRDALAKFMYANLFDWLVEQVNKALEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVEFEDNQVCLDLFEKKPLGLLSLLDEESNFPRATDLTLATKLKQHLSSNPCFKGESGKAFSVRHYAGEVTYDTNGFLEKNRDPLPSDSIKLLSSCSCELLQSFSQVLDPSQQTNSSHLGAMESKRQSVGTKFKGQLFKLMHQMESTTPHFIRCIKPNAKQVPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFAKRYGLLLSEAHTSLDPLSISIAILQQFNIPPEMYQVGYTKLYLRSGQVGVLEDRRKHILWGILSVQRSFRGYQVRSIFRELKNRATTLQSFIRGEIARKKYGVMMESSITISSEHDQQIEAAIVIQSVIRGWLVRRHASSLYRPKKHHENPRHRRRSRPKFPEIQDVLSRELAQNLPSALAELQKRVVKAEVTIEQREVENSQLRDQLKQFERRWIEYENKMKSMEEMWQRQMVSLQMSLAAARKSLASASGQHAKHDALAQYGSDSEDTTSMESRTPRTPGVSTPLKYSCSLSELGAVREVNSCANSVSSLAREFEQQRHVFDEEAKAMLEGQNGNMKCYAEYKKLKRRFEGWKKEYKIRLKEIKAKVHRNPEMDRGRRKWWGKLSSKAHSLGRE 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01945 1194 PRINTS Myosin heavy chain signature 597 625 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu08g01945 1194 PRINTS Myosin heavy chain signature 312 339 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu08g01945 1194 PRINTS Myosin heavy chain signature 269 294 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu08g01945 1194 PRINTS Myosin heavy chain signature 223 242 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu08g01945 1194 PRINTS Myosin heavy chain signature 544 572 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu08g01945 1194 ProSiteProfiles Myosin motor domain profile. 193 854 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu08g01945 1194 ProSiteProfiles IQ motif profile. 859 885 IPR000048 GO:0005515
Adu08g01945 1194 MobiDBLite consensus disorder prediction 54 71 - -
Adu08g01945 1194 Gene3D - 860 906 - -
Adu08g01945 1194 MobiDBLite consensus disorder prediction 1047 1084 - -
Adu08g01945 1194 Gene3D - 368 424 - -
Adu08g01945 1194 Gene3D Myosin VI head, motor domain, U50 subdomain 425 533 - -
Adu08g01945 1194 Pfam IQ calmodulin-binding motif 882 899 IPR000048 GO:0005515
Adu08g01945 1194 Pfam IQ calmodulin-binding motif 918 935 IPR000048 GO:0005515
Adu08g01945 1194 CDD MYSc_Myo8 207 842 IPR036022 -
Adu08g01945 1194 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 140 189 IPR004009 GO:0003774|GO:0005524|GO:0016459
Adu08g01945 1194 Pfam Myosin head (motor domain) 195 842 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu08g01945 1194 ProSiteProfiles IQ motif profile. 879 908 IPR000048 GO:0005515
Adu08g01945 1194 ProSiteProfiles IQ motif profile. 916 945 IPR000048 GO:0005515
Adu08g01945 1194 Gene3D - 556 744 - -
Adu08g01945 1194 PANTHER MYOSIN 114 1187 - -
Adu08g01945 1194 Gene3D - 788 855 - -
Adu08g01945 1194 Gene3D Kinesin motor domain 192 787 IPR036961 -
Adu08g01945 1194 SMART MYSc_2a 187 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu08g01945 1194 MobiDBLite consensus disorder prediction 1 73 - -
Adu08g01945 1194 MobiDBLite consensus disorder prediction 97 120 - -
Adu08g01945 1194 SMART iq_5 852 877 IPR000048 GO:0005515
Adu08g01945 1194 SMART iq_5 878 900 IPR000048 GO:0005515
Adu08g01945 1194 SMART iq_5 915 937 IPR000048 GO:0005515
Adu08g01945 1194 MobiDBLite consensus disorder prediction 1062 1084 - -
Adu08g01945 1194 Coils Coil 978 1026 - -
Adu08g01945 1194 MobiDBLite consensus disorder prediction 14 33 - -
Adu08g01945 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 904 IPR027417 -
Adu08g01945 1194 PANTHER MYOSIN-2 ISOFORM X1 114 1187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01945 Adu-Chr8 32517718 32525345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01945 3 1183 Myosins gene family AT5G54280 58.523 0.0 1435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01945 K10357 - gmx:100819335 1674.45