Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01922 ATGATGAGAACTAGAGTTATTTGCTTCTTATTATTGGTGTATATAACAAAATCCTTTTCACTAGACATGATTACACCAAGTCAATCCATGAAAGATGGTGATACTTTGGTTTCAGCTGGTGGAACTTTTGAACTTGGATTCTTCAGCCCCGGAGACTCAAGTGGTCGATACCTGGGAATATGGTACAAGCAATCTCCTTCAACACTGACATGGGTTGCCAACCGGAACAAACGAATCAACAGCAACTCATCAGTGTTGGAAATCAACAACCAAGGAGTTCTTGTACTGCACAATGGCTCAAACAACACATTCTGGTCCTCCAAAGTGTCGAAAGCAGCAGAGAATCCGGTTGCACAGCTCTTGGACTCAGGAAATCTTGTTGTGAGAGATCGAAATGGTGGTAAACTGGAGAATCTCTTATGGCAAAGTTTTGATTATCCTTGTGATACTTTGTTGCCAGGAATGAAACTTGGATGGAATCTAGAGACAGGACTAAATAGGTTCCTAACTTGTTGGAAAAGTACAGACGATCCTGATTCTGGAGACTACTCGTTTAAAATAGATCTTAGAGGTTATCCACAAGCAGTTCAATTGAAGGGAGATTCTATAATAAGCAGGGCAGGTTCATGGAATGGACTTAGCTTCACAGCACTTCCATATCATAAGCAAAGTCCAGTATTTAAATCTGAGTTTGTTTTGAATGAAAAGGAAATATTCTATGAGTTCCAAGTCCTTGACAATTCTACTTTTTTTAGATACGTCATGACATCTTCGGGGAATCGGCAGCTTTTGCATTGGACAAGTGAAACCAATGTCTGGGAGACTCTCATAACTATACCATCAGCTCGGTGCGACAATTATGCATTGTGTGGCGAGAATTCTGTTTGCAATTCAGTGAACACTCCAGATTGTGCTTGCCTGGAAGGATTTGCACCAAAGGTTCAAAGAGAGTGGGATATGTCATATTGGTCTAATGGTTGTGTTAGGATCACCCCATTAAGTTGTAGCAAAGATGGGTTCATGAAGTACACGGGGATTGTTCTTCCTGACACGTCTTCATCTAGGTATAATAAGACCATTGACCTTCAAGAATGTGAGAGCTTATGTCTGCAAAACTGTTCCTGTACAGCATATGCAAATTTGGATAAGCGCGACGGAGGAAGTGGCTGCTTACTTTGGTTCGGTGATCTGATTGATATGAGGCAATCATATGAAGGTGGCCAAGATATTTATATTCGAGTTCCTTCTTCGGAGCTAGAACATAACAAGAAGATTTACAAAAAGAAGCTTGTAGGCATCATTACTGGCTCTGCTGTATTCATGATATGCTTAATACTTGGACTTGCCATATGTTTATGGAAAAATAAATTTGAGAAGCCAGCAGGGATGTCGAAAGTGGGTTTCTGGAAAGAACTATTATGCAGAAGGGTGGAGGAGGACAGTGATATTCCAACATTTGATTTATCAACCATATTTTATGCCACAAATTGCTTTTCTAGCTACAACAAATTTGGAGCAGGTGGCTTCGGACTTGTGTACAAGGGTGTGCTTGCTGATGGCACTGAGATCGCTGTCAAGAGGCTTTCGAAGAATTCTGAGCAAGGACAGCAAGAGTTCAAAACTGAAGTGCAGTTAATTGCTAAACTTCAGCATCGCAATCTTGTAAAGCTTCTCGGTTGTTGCATTAAACAAAAAGAGAAACTCTTGATTTACGAGTTCATGCCAAACAGAAGTTTGGACCACTTTATTTTTGATGATGGTAGAAGAAAATTATTAGATTGGACTAAGCGCTTCCAAATCATTAGTGGGATAGCTCGAGGCCTACTTTATCTACATCATGACTCAAGGCTAAGAATCATCCATAGAGATCTTAAAACAAGCAACATTCTTCTTGACAATGATATGAATCCAAAAATATCAGACTTTGGTCTCGCAAGGACATTTGGTGGAGATCAAACCGAGGCCTGCACAAAGAGAGTGATGGGAACTCATGGTTATATCTCTCCTGAGTACCCAATGCATGGCTCTTTCTCGACGAAATCTGATGTGTTTAGCTTTGGCGTAATTATGCTTGAGGTCGTTAGTGGGATGAAGAACAAGGAACTCTCTATCCCGCACCAATTTGTTAACCTTCTTGGACATGCATGGGAATTGTGGACTAAGGAGAGGGCTATGGAGCTTGTAGATAAATCGCTTGGTGATTCAGTTGATGAAGCTCAAGTGTTGAGATGCATTCACATAGGGCTTTTGTGTGTGCAAGAGAGACCAGAAAACAGGCCTAACATGTCATCAGTAATCCATATGCTCAATGATGATAAGCCGCTTGCTCGGCCAAAGCAGCCAGCATTTTATCCTCACCAAGAAAGTAATTCTTCAACTAAAACCAGTGAAATGTGTTCAAATAATGATATTTCCATCACACTGTTGGAGGCCAGATAG 2439 0.408 MMRTRVICFLLLVYITKSFSLDMITPSQSMKDGDTLVSAGGTFELGFFSPGDSSGRYLGIWYKQSPSTLTWVANRNKRINSNSSVLEINNQGVLVLHNGSNNTFWSSKVSKAAENPVAQLLDSGNLVVRDRNGGKLENLLWQSFDYPCDTLLPGMKLGWNLETGLNRFLTCWKSTDDPDSGDYSFKIDLRGYPQAVQLKGDSIISRAGSWNGLSFTALPYHKQSPVFKSEFVLNEKEIFYEFQVLDNSTFFRYVMTSSGNRQLLHWTSETNVWETLITIPSARCDNYALCGENSVCNSVNTPDCACLEGFAPKVQREWDMSYWSNGCVRITPLSCSKDGFMKYTGIVLPDTSSSRYNKTIDLQECESLCLQNCSCTAYANLDKRDGGSGCLLWFGDLIDMRQSYEGGQDIYIRVPSSELEHNKKIYKKKLVGIITGSAVFMICLILGLAICLWKNKFEKPAGMSKVGFWKELLCRRVEEDSDIPTFDLSTIFYATNCFSSYNKFGAGGFGLVYKGVLADGTEIAVKRLSKNSEQGQQEFKTEVQLIAKLQHRNLVKLLGCCIKQKEKLLIYEFMPNRSLDHFIFDDGRRKLLDWTKRFQIISGIARGLLYLHHDSRLRIIHRDLKTSNILLDNDMNPKISDFGLARTFGGDQTEACTKRVMGTHGYISPEYPMHGSFSTKSDVFSFGVIMLEVVSGMKNKELSIPHQFVNLLGHAWELWTKERAMELVDKSLGDSVDEAQVLRCIHIGLLCVQERPENRPNMSSVIHMLNDDKPLARPKQPAFYPHQESNSSTKTSEMCSNNDISITLLEAR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01922 812 SMART blect_4 27 147 IPR001480 -
Adu08g01922 812 PANTHER - 7 811 - -
Adu08g01922 812 SMART serkin_6 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01922 812 Pfam S-locus glycoprotein domain 206 313 IPR000858 GO:0048544
Adu08g01922 812 Pfam Protein tyrosine and serine/threonine kinase 501 769 IPR001245 GO:0004672|GO:0006468
Adu08g01922 812 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
Adu08g01922 812 Pfam PAN-like domain 335 400 IPR003609 -
Adu08g01922 812 ProSiteProfiles Protein kinase domain profile. 498 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01922 812 ProSiteProfiles PAN/Apple domain profile. 335 415 IPR003609 -
Adu08g01922 812 MobiDBLite consensus disorder prediction 784 798 - -
Adu08g01922 812 Gene3D Phosphorylase Kinase; domain 1 469 573 - -
Adu08g01922 812 CDD B_lectin 27 147 IPR001480 -
Adu08g01922 812 Pfam D-mannose binding lectin 68 173 IPR001480 -
Adu08g01922 812 SUPERFAMILY Protein kinase-like (PK-like) 481 793 IPR011009 -
Adu08g01922 812 SMART ntp_6 335 414 IPR003609 -
Adu08g01922 812 Gene3D Hepatocyte Growth Factor 333 411 - -
Adu08g01922 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Adu08g01922 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 178 IPR036426 -
Adu08g01922 812 CDD PAN_AP_plant 331 415 - -
Adu08g01922 812 PANTHER - 7 811 - -
Adu08g01922 812 CDD STKc_IRAK 505 770 - -
Adu08g01922 812 Gene3D Transferase(Phosphotransferase) domain 1 574 781 - -
Adu08g01922 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Adu08g01922 812 MobiDBLite consensus disorder prediction 777 798 - -
Adu08g01922 812 Gene3D - 17 144 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01922 Adu-Chr8 31955671 31958855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01922 344 783 Receptor kinase-like Gene Family AT4G23320 48.115 2.54e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01922 PK_Tyr_Ser-Thr 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01922 - - ahf:112769728 1640.94