Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01920 ATGGAAAAGTTGAAGATGCTGTGGTCTTGGTCCTTTCTATTCTCACTTATATTAAGAACCTCCACCTCACTTGACAATATAACCGTTTTTCAATCCCTCAGCGATGGAGAGACATTGATTTCACATGAAGGAATCTTTGAACTTGGTTTCTTCAGTCCTGGAAACTCAAAGGGCCGATACGTAGGTATCTGGTACCATAATATGTCCCCTTTAACAGTTGTGTGGGTTGCCAACAGAGAAACTGCACTCAATGATACCTCTGGAGTTTTAAAAGTAACCCATCAAGGACTTGTTCTCCTTGTTAATGGCACCAGCAACAGCACTGTGTGGTCTTCCACCATGTCAATCAAAGCGGAGAATCCGGTTGCACAGCTCCTGGTCTCAGGAAATCTTGTTGTCAAAGATGGCCATAATGAGGAGAACTTCTTGTGGCAGAGTTTTGATTTTCTTGGCGATACTTTCTTACCAGGATCAAAGATAGGTTGGGATCCAGTGACAGGGATAGAGAGAACCTTAACATCTTCGAAAAGTGCTGATGATCCCGGCCATGGAGACTTCAAATTCAGAATAGACCCCAGAGGCTATCCACAAGCTGTTCTAACGAACGGAACGGTTATAATGGTCAGAGTAGGACCCTGGAATGGACTTATGTTTTCAGGAGCTACCATTTATTTGCGCTATAGTAAATTACTGCCAACTGATTATGATTTCATTGATAAGGAGCTAATTTGTAAACTCCAACCTTTACATGCATATAGTGTTATTAGAAGTGTGGTGACCCCTTGGGGTGGTGTGCAGCTTCTGCATTGGTCAAGACAAACCAGTAGCTGGGAGACATTTCTTTCTTTACCAGAAGGTGAATGTGACAAGTATGCGCACTGTGGCGCAAATTCTGTTTGTAGAGTCACTCCGGCTCCAATCTGCACATGCCTAGAAGGATTTGTTCCAAAATACTCAAGAAAGTGGAAGGACATGTATTGGTCTGATGGTTGTGTTAGGATCACTCCATTAAGTTGCAGCAAAGATGGTTTCAAGAAGCACTCAGGTGTGGTGTTGCCTGACACATCTACCTCTTGGCATAACATGACCATGAACCTGCAGGAATGTGAGGCCTTGTGTAGGAAAAATTGTTCCTGTACGGCATATTCCAATTTGGATGTCCGTGGCGGAGGAAGTGGTTGCATACTTTGGTTTCATGATTTGATTGATATGAGACAAGGAGGACAAGATCTTTATATTCGACTACCTATGTCAGAGCTAGATGATAAGCAGAACAATGATTCCAGCAAGAGGAAGCTAGCAGTTATCATTGTTGGCTCTATATTGTTCATCACGATCATAATACTTGGACTGAAATCATTTCTATGGAGAAAAAGACTTGAGGAGTCAGGTGAATACATGATATTCTACATGCAACGTGATCACAAAAAGGAAAAGGAAAACATGGACCTCCCAACATTTGATTTATCAACCATAGTTTGTGCCACTGATCAATTTTCTAGCAGTAATGAATTGGGAAAAGGCGGATATGGACCAGTTTATAAGGGTGTACTTGCAAATGGGACTGAGATTGCCGTAAAGAGACTTTCCAAGAACTCTGACCAAGGACTGCAGGAGTTCAAAACGGAAGTTCAGCTAATTGCAAAACTTCAGCATCGCAACCTCGTAAAGCTTCTTGGTTGTTGCATTCAGCAAGAAGAGAAACTTTTGATTTATGAGCTCATGCCCAACAGGAGTTTGGACTACTTTATTTTTGATGATGCTAGAAGAAAATTATTAGATTGGGCTAAGCGCTTTCACATTATTCGTGGCACAGCTCGAGGCCTAGTCTACCTGCATCAGGACTCTAGGCTAAGAGTCATTCATAGAGATCTAAAAACTAGTAATATTCTTCTTGACAAAGACATGAATGCGAAAATATCAGACTTCGGTCTTGCTAGGACATTTGCATGTGATCAGATTGAAGACAAGACAAAAAGAGTGGTGGGAACTCATGGTTATATTTCGCCCGAGTATGCCGTTCGTGGCTCATTTTCAATGAAATCTGATGTGTTCGCCTTTGGTGTAATCGTGCTTGAGGTAGTCAGTGGGAGGAAGACTAGAGAGTTCTGTGTCCCTAACCGAAGTCTTAACCTTCTTGGATTTGCATGGGAGCTATGGAATGAGGAGAGGACTTTGGAGCTGGTAGATGAATCACTGTGCGATTCGGTGAATCAAGCTGAAGCATCGAGATGCATTCAGATAGGACTGTTGTGTGTGCAAGAGAGACCAGAACATAGGCCAAACATGTCATCTGTAGTTCATATGTTGGATGATGATAAACCATTGCCTCGGCCAAGGCTGCCTGCATTTTATTCACACCAACAACATTCTACACTAATTGATGGTGAAGATGGTGAAGAAGCTCATTCCGCAAATGAGGTTACCATATCATTGTTAGGGGCAAGACTGAGGCTAGTAGAAGCTTTTGCTAACAAAAATAGGGAATTTTTTAATGATAATGATCTTGACCTTCTTGGGCATGCATGGAGGTTGTGGTGTGAAGAGAGGCCATTGGAGCTTATAGATGAATCATTAACTGACTCAGTTGTTGCAACAGAATCTGAAGTGCTAAGCATAGAGCTTTTATGTGTACAAGAGAGACCAGAAAATAGGCCAGACATGTCAGCCATAGTTCTAATGCTGAATGGTGAGAAACCATTACCAAGGCCAAGGGACCTACTTTTTATCCACATCAGTTTGGCTTTTCATAAGGGAATTGTGCAGTAA 2769 0.4207 MEKLKMLWSWSFLFSLILRTSTSLDNITVFQSLSDGETLISHEGIFELGFFSPGNSKGRYVGIWYHNMSPLTVVWVANRETALNDTSGVLKVTHQGLVLLVNGTSNSTVWSSTMSIKAENPVAQLLVSGNLVVKDGHNEENFLWQSFDFLGDTFLPGSKIGWDPVTGIERTLTSSKSADDPGHGDFKFRIDPRGYPQAVLTNGTVIMVRVGPWNGLMFSGATIYLRYSKLLPTDYDFIDKELICKLQPLHAYSVIRSVVTPWGGVQLLHWSRQTSSWETFLSLPEGECDKYAHCGANSVCRVTPAPICTCLEGFVPKYSRKWKDMYWSDGCVRITPLSCSKDGFKKHSGVVLPDTSTSWHNMTMNLQECEALCRKNCSCTAYSNLDVRGGGSGCILWFHDLIDMRQGGQDLYIRLPMSELDDKQNNDSSKRKLAVIIVGSILFITIIILGLKSFLWRKRLEESGEYMIFYMQRDHKKEKENMDLPTFDLSTIVCATDQFSSSNELGKGGYGPVYKGVLANGTEIAVKRLSKNSDQGLQEFKTEVQLIAKLQHRNLVKLLGCCIQQEEKLLIYELMPNRSLDYFIFDDARRKLLDWAKRFHIIRGTARGLVYLHQDSRLRVIHRDLKTSNILLDKDMNAKISDFGLARTFACDQIEDKTKRVVGTHGYISPEYAVRGSFSMKSDVFAFGVIVLEVVSGRKTREFCVPNRSLNLLGFAWELWNEERTLELVDESLCDSVNQAEASRCIQIGLLCVQERPEHRPNMSSVVHMLDDDKPLPRPRLPAFYSHQQHSTLIDGEDGEEAHSANEVTISLLGARLRLVEAFANKNREFFNDNDLDLLGHAWRLWCEERPLELIDESLTDSVVATESEVLSIELLCVQERPENRPDMSAIVLMLNGEKPLPRPRDLLFIHISLAFHKGIVQ 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01920 922 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01920 922 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 813 - -
Adu08g01920 922 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Adu08g01920 922 SUPERFAMILY Protein kinase-like (PK-like) 482 787 IPR011009 -
Adu08g01920 922 PANTHER - 12 813 - -
Adu08g01920 922 PANTHER - 825 906 - -
Adu08g01920 922 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 825 906 - -
Adu08g01920 922 Pfam Protein tyrosine and serine/threonine kinase 502 770 IPR001245 GO:0004672|GO:0006468
Adu08g01920 922 Gene3D Transferase(Phosphotransferase) domain 1 575 776 - -
Adu08g01920 922 Pfam D-mannose binding lectin 72 176 IPR001480 -
Adu08g01920 922 SMART blect_4 30 150 IPR001480 -
Adu08g01920 922 SMART ntp_6 339 415 IPR003609 -
Adu08g01920 922 Gene3D Hepatocyte Growth Factor 337 412 - -
Adu08g01920 922 Gene3D - 20 147 IPR036426 -
Adu08g01920 922 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Adu08g01920 922 CDD STKc_IRAK 505 771 - -
Adu08g01920 922 ProSiteProfiles Protein kinase domain profile. 499 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01920 922 PIRSF SRK 1 816 IPR024171 GO:0004674
Adu08g01920 922 PIRSF SRK 823 916 IPR024171 GO:0004674
Adu08g01920 922 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 180 IPR036426 -
Adu08g01920 922 CDD B_lectin 31 149 IPR001480 -
Adu08g01920 922 CDD PAN_AP_plant 335 416 - -
Adu08g01920 922 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Adu08g01920 922 Gene3D Phosphorylase Kinase; domain 1 472 574 - -
Adu08g01920 922 ProSiteProfiles PAN/Apple domain profile. 339 416 IPR003609 -
Adu08g01920 922 Pfam PAN-like domain 339 404 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01920 Adu-Chr8 31893990 31941348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01920 837 905 Receptor kinase-like Gene Family AT4G23190 43.662 2.18e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01920 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01920 - - aip:107611884 1269.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01637 03 26815688 26820445 Adu08g01920 08 31893990 31941348 PCT