Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01919 ATGGCTGTCTCTATTGCAAGAGACACAATCAACACACTGCAATCAATAAGTGATGGTGAGATATTAGTTTCAGCAGATGAAACCTTTGCGTTGGGATTCTTCAGCCCTGGAACTTCCAATAACCGTTATGTCGGAATTTGGTATAACAAAGATCCAACAAAGGCAATAGTATGGGTTGCAAACAGAGAAAAACCCCTCACTGACTCCTCAGGGGTTTTGAAGGTCAACGACATCGGAATTTTAGTCCTTCTTGATAGTAATAATAGTCTTATTTGGTCATCCAACACGACGCGATCGGCACAAAATCCGGTTGCAAAGCTTTTGAATTCTGGGAATTTTGTTGTGCAGGATGACAGCAATAGCGACACGGAAGATTTGCTGTGGCAAAGTTTTGACTATCCAGGCGACACAATCTTGCCTGGACAGAAGTTGGGAAGAAACTTTGCTACAGGACTAAATCGGAGGACAACATCATGGAAAAGCTCTGATGATCCTTCTCAAGGTAGCTTTAGCTATCAATTCGATATTGATGGATATCCGCAATTAGTATTAAGAGAAGGCACAACAAAAAGATTCCGTTTTGGATCATGGAATGGTATTCAATTTAGTGGGGCACCTCAATTGAAAAATGAGTCTGTATTCAGATTTAGCATGATTTCTAATGAGGAAGAGGTGTATATTGTATATTGGACTGTTGATAGTTCAGTTCATCAGAGGCTGCAGATAGCAATGGATGGATTCAGCCAGCGGAGAAGTTGGAGTGGTGGAAATACAGGTTGGACCACAGTTTCGCACATACCGGTGGATGACTGTGATTATTATGGAAAATGTGGAGCATATGCTAGTTGTGATACAAACCATTTTCCAATGTGTGGATGCTTAGATGGATTTGTGCAGAATACTATTGACTCATCAAGTGGTTGTGTTAGGAAAACCTCATTAAGTTGCAATAATTCAGACGGGTTTGTGAAGTTTTCGGGGCTAAAATTACCAGACACAAAAGGAACTTGGTTTAATACAAGTATGAGTTTTGAGGATTGTAGGATTTTGTGCTTGAAAAACTGCTCTTGTACGGCTTATGCAGCTTTGGATGTCAGCAAAGGGCCAAATTCAAATGGTTGTTTACTTTGGTTTGGAAAGCTGATGGATATGAAAGTGATGACTGCATCTGAAGATATTTATGTAAAGATGGCAGGGAAAGATGTAGAAGCAATTGTGCGAAAAAGATTGCCGAAGTTCAAGAAAAAGAAGCAAAAGATTACCACTGCCATAATCTGGGTGTTGTCTTCTGGAATTTTGATCTTATGCTTGGCCATCATCATTTATAGATGGGAGATGCGTAAGAAAGGAAAGATAAAAGAAGACAGAGAATCAGATGATAGTCAGCATGATGAGGAAGATCTAGAATTGCCCTTATTTTCTATAAATACGGTTACTTCTGCAACAAACAATTTTTCAACTGACAACTTATTAGGGACAGGTGGTTTTGGACCAGTTTATAAGGGTATCTTGGAAGATGGACAGGAAATAGCTGTCAAGAGGCTTTCGAAGAATTCAAGCCAAGGATTCGAAGAGTTCAAAAATGAAGTTATGCATGTTTCCAAACTTCAGCACAGGAATTTAGGAAAGCTACTAGATTGGCCAAAGCGTTTTCGTATCATCAATGGGATTGCGAGAGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAGGCTGGGAATGTTTTGTTAGATGATGAATTGAATCCTAAAATCTCGGACTTTGGAACAGCAAGAAGCTTTGTAGGAAATGAAAGTGAAGCAAATACAAGACATATTGTTGGAACTTATGGCTATCTATCACCAGAGTACATAGTTGGTGGCCTGTATTCAACAAAATCTGATGTCTATAGCTTTGGTGTACTAATATTAGAAATAGTTAGTGGGAAGCGAAATAAAGGATTCATCGATATTGACCACTACTTTAATCTTCTTGCCGATGCATGGACACTTCTAGCTGAAGACAAGTGCTTAGAAATAGTTGATGCATCTATCAGAGACTCAATTAATTTGACAGAAGTCATAAGAACAATTCATGTCGGTTTGCTATGTGTGCAACGAAATCCAGAAGATCGACCAAGCATGTCATATGTGCTTACGATGCTGAGTAGTGAATGGGAACTACCTCAGCCAAAGAAGCCAGGGTTCTTTATTGAGAAAGATGTGGTTGGTGACCATTCTACATTAAGCAACAATGAACTCACGGCTACTCAGGTCCATCCGCGGTAA 2289 0.3941 MAVSIARDTINTLQSISDGEILVSADETFALGFFSPGTSNNRYVGIWYNKDPTKAIVWVANREKPLTDSSGVLKVNDIGILVLLDSNNSLIWSSNTTRSAQNPVAKLLNSGNFVVQDDSNSDTEDLLWQSFDYPGDTILPGQKLGRNFATGLNRRTTSWKSSDDPSQGSFSYQFDIDGYPQLVLREGTTKRFRFGSWNGIQFSGAPQLKNESVFRFSMISNEEEVYIVYWTVDSSVHQRLQIAMDGFSQRRSWSGGNTGWTTVSHIPVDDCDYYGKCGAYASCDTNHFPMCGCLDGFVQNTIDSSSGCVRKTSLSCNNSDGFVKFSGLKLPDTKGTWFNTSMSFEDCRILCLKNCSCTAYAALDVSKGPNSNGCLLWFGKLMDMKVMTASEDIYVKMAGKDVEAIVRKRLPKFKKKKQKITTAIIWVLSSGILILCLAIIIYRWEMRKKGKIKEDRESDDSQHDEEDLELPLFSINTVTSATNNFSTDNLLGTGGFGPVYKGILEDGQEIAVKRLSKNSSQGFEEFKNEVMHVSKLQHRNLGKLLDWPKRFRIINGIARGLLYLHQDSRHRIVHRDLKAGNVLLDDELNPKISDFGTARSFVGNESEANTRHIVGTYGYLSPEYIVGGLYSTKSDVYSFGVLILEIVSGKRNKGFIDIDHYFNLLADAWTLLAEDKCLEIVDASIRDSINLTEVIRTIHVGLLCVQRNPEDRPSMSYVLTMLSSEWELPQPKKPGFFIEKDVVGDHSTLSNNELTATQVHPR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01919 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Adu08g01919 762 SMART ntp_6 317 397 IPR003609 -
Adu08g01919 762 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 543 754 - -
Adu08g01919 762 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 3 545 - -
Adu08g01919 762 PIRSF SRK 1 545 IPR024171 GO:0004674
Adu08g01919 762 PIRSF SRK 542 762 IPR024171 GO:0004674
Adu08g01919 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 165 IPR036426 -
Adu08g01919 762 Pfam Protein kinase domain 553 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01919 762 CDD B_lectin 14 134 IPR001480 -
Adu08g01919 762 PANTHER - 3 545 - -
Adu08g01919 762 PANTHER - 543 754 - -
Adu08g01919 762 ProSiteProfiles Bulb-type lectin domain profile. 7 128 IPR001480 -
Adu08g01919 762 Pfam Protein tyrosine and serine/threonine kinase 488 545 IPR001245 GO:0004672|GO:0006468
Adu08g01919 762 Pfam D-mannose binding lectin 56 160 IPR001480 -
Adu08g01919 762 Pfam PAN-like domain 316 384 IPR003609 -
Adu08g01919 762 SUPERFAMILY Protein kinase-like (PK-like) 470 731 IPR011009 -
Adu08g01919 762 Pfam S-locus glycoprotein domain 192 300 IPR000858 GO:0048544
Adu08g01919 762 Gene3D - 2 131 IPR036426 -
Adu08g01919 762 SMART serkin_6 485 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01919 762 ProSiteProfiles PAN/Apple domain profile. 316 398 IPR003609 -
Adu08g01919 762 Gene3D Phosphorylase Kinase; domain 1 445 545 - -
Adu08g01919 762 ProSiteProfiles Protein kinase domain profile. 485 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01919 762 CDD PAN_AP_plant 312 398 - -
Adu08g01919 762 Gene3D Transferase(Phosphotransferase) domain 1 546 727 - -
Adu08g01919 762 SMART blect_4 13 134 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01919 Adu-Chr8 31889672 31893232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01919 411 736 Receptor kinase-like Gene Family AT4G23320 47.238 7.64e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01919 Pkinase 1.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01919 - - adu:107462379 1239.94