Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01917 ATGGAAGCCTTTAGCTTTCTTCTGTTATGCTTCTCTCTGCTGGATTTAACAGCATTTTGTGTTGCAAGAGACACAATTACCACACTGCAATCTATAAGTGATGGTGACACATTAGTTTCAGCAGATGAAACCTTTGCATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCATTATGTTGGAATTTGGTATAACAAAGATCCAACAAAGGCAATAGTATGGGTTGCAAACAGAGAAAACCCCCTCACTGACTCATCAGGGGTTTTGAAGGTCAACAACACCGGAATTCTAGTCCTTCTTGATAGTAATAATAGTCTTATTTGGTCATCCAACACCACACGATCGGCACAAAATCCAGTTGCAAAGCTTTTGAATTCTGGGAATTTTGTTGTGCAGGATGACACCAACAGTGACACGGAAGATTTTCTGTGGCAAAGTTTTGACTATCCAGGCGACACAATCTTGCCTGGACAGAAGTTTGGAAGAAACTTAGCTACAGGATTAAATTGGTTGATAACATCATGGAAAAGCTCTGATGATCCCTCTCAAGGTAGCTTTAGCTATCAATTCGACATTGATGGATATCCGCAATTAGTATTAAGAGAAGACACAACAAAAAGATTTCGTTTTGGATCATGGAATGGTATTCAGTTTAGTGGGGGACCACAGTTGAAAAATGACTCTGTATTTAGATTTAGCATGATTTCTAATGAGCAAGAGGTATATTATGTATATTGGCTTGTTGATAATTCAGTGCATCAAAGGTTGCAGGTAACATCGGACGGATTCAGCCACCGGACAAGTTGGAGTGGTGGAAATACAGGTTGGACCACAGTTTCGCACTTACCGGTGGATGACTGTGATTATTATGGAAAATGTGGAGCATATGCTAGTTGTGATACAAACAGTTTTCCCATGTGTAATTGCCTGGATGGTTTTGTACAGAAAACAACTGATTCATCAAGTGGTTGTGTTAGGAGAACTTCATTGAGTTGCAATCATTCAGATGGGTTTGTGAAGTTTTCGGGGCTAAAGTTACCAGACACTGAAGGGACATGGTTTAATAGAAGCATGAGACTTGAGGATTGTAGGATCTTGTGCTGGAACAATTGCTCTTGTATGGCTTATGCAGCTTTGGATGTCAGCAAAGGGCCAAATGGTTGTTTACTTTGGTTTGGTAATCTTGTAGATATGAAAGCGTTGAGTGCATCGGATGAAGATATTTATATAAGGATGGCAGGCAAAGATGTAGAAGCTATTGAACAAAACAGATCACAGAAGTCCAAGAAACGGAAGCGAAAGATTATTATTGCCGTAAGCTGTGTGTTGTCTTTTGGAATTTTGATCCTATGCTTGGCCTTCATCTATAGATGGAAGAAGCATCTGAAAGGAAAGATAAAAGAAGAAACAGAATCAGGTGCAATAAATAGTCACCATGATGAGGATGATCTGGAACTGCCTTTATTTGATATGTGCACAATTACTTCTGCAACAAGTAATTTTTCAAGTGACAATATACTAGGGACAGGTGGTTTTGGATCAGTTTATAAGGGTATCTTGGAAGATGGGCAGGAGATAGCTGTCAAGCGACTTTCGCAGAATTCAAGTCAAGGACTCCAAGAGTTCAAAAATGAAGTTATGCATATTGCTAAACTTCAGCACCGAAATTTAGTGAAGCTATTAGGGTGCTGCATTCAAGCAGGCGAGAGAATGTTGATTTATGAATTTATGCACAACAAAAGCTTGGACTTCTTTATATTTGATTGTGAGAGGGGAAAACTACTAGACTGGCCAAGGCGTTTTCTTATTATTAAtggaattgctagaggcttgctttatcttcatcaagattcaagatatagaatagttcatagagatcttaaggctgggaatgttttgttagatgacgaattgaatcctaaaatctcagactttggactagcacgaaacttcgtaggaaatgaaaacCAAGCAAAAACAAGTCATATTGTTGGGACTTACGGCTATCTGTCACCGGAGTGCATAGTTGACGGGATATACTCAACAAAATCTGATGTCTACAGCTTCGGAGTGCTGGTGTTAGAGATAGTTAGTGGGAAGAGAAACAGAGGATTCATCCATATTGATCACAATTTGAATCTTCTTGGGCATGCATGGACACTTTTCACAGAAGGCAAGTGCTTAGAAATAGTCGATGCATCTATCAAAGACTCTATTGATTTGCCAGAAGTCCTAAGATCAATTCATGTTGGTCTACTATGTGTGCAACGAAATCCAGAAGATCGACCAAGCATGTCGTATGTGCTTATGATGCTGAGTAGTGAATGGGCATTGCCTCAGCCAAAGAAGCCCGGATTCTTTATTGAGAGAGATGTGGTTGGTGACAGTTCTTCATCAAGCAACAATAAACTATTATCAGTTAATCATCTCACAGTCACCCAAGTCTGTCCGCGATAG 2457 0.3744 MEAFSFLLLCFSLLDLTAFCVARDTITTLQSISDGDTLVSADETFALGFFSPGTSKNHYVGIWYNKDPTKAIVWVANRENPLTDSSGVLKVNNTGILVLLDSNNSLIWSSNTTRSAQNPVAKLLNSGNFVVQDDTNSDTEDFLWQSFDYPGDTILPGQKFGRNLATGLNWLITSWKSSDDPSQGSFSYQFDIDGYPQLVLREDTTKRFRFGSWNGIQFSGGPQLKNDSVFRFSMISNEQEVYYVYWLVDNSVHQRLQVTSDGFSHRTSWSGGNTGWTTVSHLPVDDCDYYGKCGAYASCDTNSFPMCNCLDGFVQKTTDSSSGCVRRTSLSCNHSDGFVKFSGLKLPDTEGTWFNRSMRLEDCRILCWNNCSCMAYAALDVSKGPNGCLLWFGNLVDMKALSASDEDIYIRMAGKDVEAIEQNRSQKSKKRKRKIIIAVSCVLSFGILILCLAFIYRWKKHLKGKIKEETESGAINSHHDEDDLELPLFDMCTITSATSNFSSDNILGTGGFGSVYKGILEDGQEIAVKRLSQNSSQGLQEFKNEVMHIAKLQHRNLVKLLGCCIQAGERMLIYEFMHNKSLDFFIFDCERGKLLDWPRRFLIINGIARGLLYLHQDSRYRIVHRDLKAGNVLLDDELNPKISDFGLARNFVGNENQAKTSHIVGTYGYLSPECIVDGIYSTKSDVYSFGVLVLEIVSGKRNRGFIHIDHNLNLLGHAWTLFTEGKCLEIVDASIKDSIDLPEVLRSIHVGLLCVQRNPEDRPSMSYVLMMLSSEWALPQPKKPGFFIERDVVGDSSSSSNNKLLSVNHLTVTQVCPR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01917 818 SUPERFAMILY Protein kinase-like (PK-like) 486 772 IPR011009 -
Adu08g01917 818 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Adu08g01917 818 Pfam Protein tyrosine and serine/threonine kinase 504 770 IPR001245 GO:0004672|GO:0006468
Adu08g01917 818 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Adu08g01917 818 Pfam PAN-like domain 332 398 IPR003609 -
Adu08g01917 818 Gene3D - 19 147 IPR036426 -
Adu08g01917 818 Pfam D-mannose binding lectin 72 176 IPR001480 -
Adu08g01917 818 CDD PAN_AP_plant 328 413 - -
Adu08g01917 818 CDD B_lectin 30 150 IPR001480 -
Adu08g01917 818 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 813 - -
Adu08g01917 818 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Adu08g01917 818 CDD STKc_IRAK 507 772 - -
Adu08g01917 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 181 IPR036426 -
Adu08g01917 818 PANTHER - 12 813 - -
Adu08g01917 818 Gene3D Hepatocyte Growth Factor 328 410 - -
Adu08g01917 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Adu08g01917 818 SMART ntp_6 333 412 IPR003609 -
Adu08g01917 818 ProSiteProfiles Protein kinase domain profile. 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01917 818 Gene3D Transferase(Phosphotransferase) domain 1 577 779 - -
Adu08g01917 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Adu08g01917 818 Pfam Domain of unknown function (DUF3403) 773 818 IPR021820 GO:0004674
Adu08g01917 818 Gene3D Phosphorylase Kinase; domain 1 475 576 - -
Adu08g01917 818 SMART blect_4 29 150 IPR001480 -
Adu08g01917 818 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Adu08g01917 818 SMART serkin_6 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01917 Adu-Chr8 31877950 31882020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01917 489 818 Receptor kinase-like Gene Family AT4G23290 54.386 1.84e-116 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01917 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01917 - - adu:107462379 1462.97