Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01912 ATGACATTTAATGGTGGATCTTGGAATGGTCTTCGGTTTGGTGGAATTCCCCAGTTAAAACATAATACTTTTTACAACTTTTACTTTGTTTACAGCAAGGAAGAGATATATTACACATATGAGCTTGTCGATAGTGCTGTATATTCAAGGAGTGTGCTATCTGCAGACGGATCAATGACTCGTTATGTGTGGAGTGTTACAAATAAGAGTTGGAGTGTCTATTTAAAATTGCCAACTGATATCTGTGATGATTATGGTAAATGTGGAGCATATGGTATCTGTAATGTAGCCAATTCCCCTGTATGTAGTTGCTTATTGAACCGATTCGAACCTAAAGACCCTGAAGAATGGAATCAGACAGGTTGGTTTAATGGCTGTGTTAGAATCAATAAATTGAGTTGCCAGGATGATGGATTTGTAAAGTTGTCTGGTTTAAAGTTACCAAACACACAAAGAGCATCATGGTTAAATAATAGCGTGAGTCTTGAGGAGTGTGCTAATCTATGCATGAAGAATTGTTCCTGCACGGCTTATGCTTCCTTGGATATCAGGAATGGAGGAACAGGGTGTTTATTCTGGTATGATGAGCTGATAGATATCAGAGTTCTGAGTGATCCACAGCAAGATCTTTTTGTCAGAATGTCAAGGAAAGATATAGATGAAATTAAGAAGTCATCACATAAATCCAAGATCAGGAAGCTGCAGATTATTGCCGCCATCACAGTCATATCTATAGGAATTTTGATCTTATGCCTATCCTTCATGCTATACAGAAGAAAGAAGCAGCAGATAAACTATAGAAACATGAGGGACAGTCCAGAAAGATATGCACATGTAATACAAGAGCATCAGGAGGAAGAACTAGAACTACCACTGTTTGATATGGCTACACTTATTGCTGCAACCAATAACTTCTCCACCAGTAACATATTAGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGAACGATGGAAGAGAAATAGCAGTTAAGAGGCTCTCAGTAAATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTGTTGAATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGGTGTTGCATTCAAGAAGAAGAAAGGATGCTGGTCTATGAATATATGCCAAATAAAAGCTTGGACTACTTCATATTTGagatagtaagtggaaaaagaaataGAGGGTTCAGCAACAGAAATCATCGCTTTAATCTTCTGGGGCATGTATGGAAACTCTTTATAGAAGGTAATTGCTCTGAAATAGTTGATCCGTCCATCAGAAATTCGTCCGATTTATCCGGAGTCATAAGAGCAATTCATGTGGGTCTACTTTGTGTTCAACAGAATCCAGAAGACAGGCCAAGCATGTTGCATGTTCTTATGATGCTAAGTAGCGAATGCACATTGCTTCAACCAAAAATGCCAGGGTTCTTCACTGAGAGAGATCTTGTTGGTGACACTTCATCAAGCAAGAGTGAACTAGTGTCATTTAATGAAATCACAGTTAGTGTGGTGCATCCACGGTAG 1545 0.3819 MTFNGGSWNGLRFGGIPQLKHNTFYNFYFVYSKEEIYYTYELVDSAVYSRSVLSADGSMTRYVWSVTNKSWSVYLKLPTDICDDYGKCGAYGICNVANSPVCSCLLNRFEPKDPEEWNQTGWFNGCVRINKLSCQDDGFVKLSGLKLPNTQRASWLNNSVSLEECANLCMKNCSCTAYASLDIRNGGTGCLFWYDELIDIRVLSDPQQDLFVRMSRKDIDEIKKSSHKSKIRKLQIIAAITVISIGILILCLSFMLYRRKKQQINYRNMRDSPERYAHVIQEHQEEELELPLFDMATLIAATNNFSTSNILGKGGFGTVYQGMLNDGREIAVKRLSVNSRQGLQEFKSEVLNVVKLQHRNLVKLLGCCIQEEERMLVYEYMPNKSLDYFIFEIVSGKRNRGFSNRNHRFNLLGHVWKLFIEGNCSEIVDPSIRNSSDLSGVIRAIHVGLLCVQQNPEDRPSMLHVLMMLSSECTLLQPKMPGFFTERDLVGDTSSSKSELVSFNEITVSVVHPR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01912 514 Pfam Domain of unknown function (DUF3403) 471 514 IPR021820 GO:0004674
Adu08g01912 514 Pfam Protein tyrosine and serine/threonine kinase 308 390 IPR001245 GO:0004672|GO:0006468
Adu08g01912 514 ProSiteProfiles Protein kinase domain profile. 305 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01912 514 SUPERFAMILY Protein kinase-like (PK-like) 391 480 IPR011009 -
Adu08g01912 514 Gene3D Hepatocyte Growth Factor 132 213 - -
Adu08g01912 514 PANTHER - 390 511 - -
Adu08g01912 514 PANTHER - 2 392 - -
Adu08g01912 514 Gene3D Transferase(Phosphotransferase) domain 1 385 480 - -
Adu08g01912 514 CDD PAN_AP_plant 131 213 - -
Adu08g01912 514 ProSiteProfiles PAN/Apple domain profile. 134 215 IPR003609 -
Adu08g01912 514 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 390 511 - -
Adu08g01912 514 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 2 392 - -
Adu08g01912 514 SUPERFAMILY Protein kinase-like (PK-like) 282 395 IPR011009 -
Adu08g01912 514 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Adu08g01912 514 Pfam S-locus glycoprotein domain 4 112 IPR000858 GO:0048544
Adu08g01912 514 Pfam PAN-like domain 134 200 IPR003609 -
Adu08g01912 514 Gene3D Phosphorylase Kinase; domain 1 265 380 - -
Adu08g01912 514 SMART ntp_6 134 214 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01912 Adu-Chr8 31751295 31754412 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01912 385 514 Receptor kinase-like Gene Family AT4G23220 34.058 2.15e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01912 S_locus_glycop 7.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01912 - - ahf:112705344 704.901