Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01908 ATGGAAGGCTTTACAATAATGATTCTGTTCTTTCTGATGAACTATATGGTGGTGGCTTCAACTGCAAGGGACACTATAGATTCACTGCAATCTATCAGTGATGGTGAGATAATAGTTTCTTCTGATGAAATCTTTGCATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTACGTCGGAATCTGGTTTAACAAAGATCCATCCAAGACAGTAGTTTGGGTTGCAAACAGAGAAAAACCCCTCACTGACTCGTCAGGAATTCTGAAGCTCAACAACACTGGAACTCTAGTCCTTCTTGATCGTAACAATAGTGTTATTTGGTCCTCCAACGCAACAAGATCCGTCATGAATCCAATTGGAAAGCTTTTGAATTCAGGAAATCTTGTTGTGCAAGAAAGAAGTAATAATGGTGCTAGCAAAGAAGATTTTGTATGGCAAAGTTTTGATTATCCATCCGACACGCTCTTGCCTGGACAGAAGTTAGGAACAAATCTAAAAACAGGACAGAATTGGTATCTAACGTCTTGGAACAGCTCGGACGATCCATTTCCAGGTAGATATACTTTAGAATTCGATATCAACGGATATCCTCAATTAGTCCTTAAAGATGGAGGATCTAAAAGATGGCGTGCCGGATCATGGAATGGAGTTCAATTCAGTGGAACGCCACAAGTGAAAGAAAACTCAGGCTTTAGATATAAATATGTTTCTAACGAGGAAGAGATATATTTTATGTATGAACTTATCAACAATTCAAACCCTCATAAGGTGGTTCTAACGCCGGAGGGAATCAACCAGAGAAGCCAGTGGAATCCGGACACATCGAGTTGGACCGACTTGGCAAGGCTACCCGCTGATGATTGTGACTACTATGAAACATGTGGAGCTTATTCTAGTTGTAATGTTAACAACTATCCAATGTGTAGTTGTTTGGATGGATTTGTGCAAGATAATAATAAGAAGGAGCAAGGTTTATCAGATGGTTGTGTAAGAAGAACATCATTGGATTGTTATGGAGATGGGTTTCTGAAGTATTCAGGGCTGAAATTGCCAGATACAGAAAGATCATGGTATAGTAGAAATATCAGCATTGAAGATTGTAAGATGATGTGCTTGAAGAATTGTTCATGTGTGGCTTATGCAGCTCTGGATATAAGTGAAGGCGCAAGTGGTTGTTTGATGTGGTTTGGTAATTTAAATGATATTAAAGCTCTGACTCCATATTCTCTTGAAGATATTTACATAAGGATGGCTGCTACAGAACTAGAAGCTATGCAGGAAAATGAATCACACAAATCAAACATCCGAAAGAAAAAGACTATCATCATAGTTTGTGCCTTATCTTTTAGTGTTTTAATCATATGCTTGGCCTTCATCGTCTTTAGATGGAAGATACGAAGAAAAGGTAAGCATGTATTGCATTTACATATCACATATGATACTACTTATGCAGGTGTAATGAATGACTATGAGGAAGATCTGCAATTGTCTTTGTTTGATATGTCTACAATTTCTTCTGCAACAAATAATTTTTCAGCTGATAATATTTTAGGAAAAGGTGGCTTTGGTTCGGTATATAAGGGTGTATTAAAGGATGGGAAAGAAATAGCAGTTAAGAGACTCTTACAAAATTCAAGTCAAGGAATCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCATAGGAATTTAGTGAAGCTCCTAGGATGTTGCATTTATGCAGAAGAAAGATTGCTAGTCTATGAATTTATGCCCAACAAAAGCTTGGACTACTTCATATTTGATGAAAAGAAGAGTATGTTACTAGATTGGACAAGGCGCTTTGACATTATCAATGGAATTGCTCGAGACTTTGGACTAGCTAGAAGTTTTGGAGGGAACGAAACTAAAGCAAACACTCGGCATGTTGTTGGAACTTATGGATATTTATCACCGGAATACATAATTGATGGAGTTTACTCAATAAAATCTGATGTATTCAGTTTTGGTGTATTGGTGTTAGAAATAGTGAGTGGAAGTAGAAATAGAGGATTCATTCATCAAGATCATCACTTTAATCTTCTAGGACATGCATGGAAACTATTTATGGAAGACAAAGGGTACGAAATAATTTATGCTCCAATAAGAGATGCATCTAATTTATCTTCAATGCTAAGATCAATTCATGTGGGACTACTTTGTGTGCAAAAAAGTCCAGATGAAAGGCCAAACATGTCATACGTTGTTCAAATGTTGAGTAGTGAATCCACACTACCTCCACCTAAAATGCCTGGATTCTTCACGGAAAGAGAAATGGTTGATGAAGGTTCTTCTCCAAGTAATAACAGAACATACTCAATCAATGATGTCACTGACAGCATATTGGAGGCTAGATAG 2388 0.3744 MEGFTIMILFFLMNYMVVASTARDTIDSLQSISDGEIIVSSDEIFALGFFSPGTSKNRYVGIWFNKDPSKTVVWVANREKPLTDSSGILKLNNTGTLVLLDRNNSVIWSSNATRSVMNPIGKLLNSGNLVVQERSNNGASKEDFVWQSFDYPSDTLLPGQKLGTNLKTGQNWYLTSWNSSDDPFPGRYTLEFDINGYPQLVLKDGGSKRWRAGSWNGVQFSGTPQVKENSGFRYKYVSNEEEIYFMYELINNSNPHKVVLTPEGINQRSQWNPDTSSWTDLARLPADDCDYYETCGAYSSCNVNNYPMCSCLDGFVQDNNKKEQGLSDGCVRRTSLDCYGDGFLKYSGLKLPDTERSWYSRNISIEDCKMMCLKNCSCVAYAALDISEGASGCLMWFGNLNDIKALTPYSLEDIYIRMAATELEAMQENESHKSNIRKKKTIIIVCALSFSVLIICLAFIVFRWKIRRKGKHVLHLHITYDTTYAGVMNDYEEDLQLSLFDMSTISSATNNFSADNILGKGGFGSVYKGVLKDGKEIAVKRLLQNSSQGIQEFKNEVMHIAKLQHRNLVKLLGCCIYAEERLLVYEFMPNKSLDYFIFDEKKSMLLDWTRRFDIINGIARDFGLARSFGGNETKANTRHVVGTYGYLSPEYIIDGVYSIKSDVFSFGVLVLEIVSGSRNRGFIHQDHHFNLLGHAWKLFMEDKGYEIIYAPIRDASNLSSMLRSIHVGLLCVQKSPDERPNMSYVVQMLSSESTLPPPKMPGFFTEREMVDEGSSPSNNRTYSINDVTDSILEAR 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01908 795 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 15 620 - -
Adu08g01908 795 Gene3D Transferase(Phosphotransferase) domain 1 621 755 - -
Adu08g01908 795 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 621 792 - -
Adu08g01908 795 CDD B_lectin 30 152 IPR001480 -
Adu08g01908 795 PIRSF SRK 2 620 IPR024171 GO:0004674
Adu08g01908 795 PIRSF SRK 621 795 IPR024171 GO:0004674
Adu08g01908 795 PANTHER - 15 620 - -
Adu08g01908 795 PANTHER - 621 792 - -
Adu08g01908 795 Gene3D Hepatocyte Growth Factor 337 413 - -
Adu08g01908 795 SMART blect_4 29 152 IPR001480 -
Adu08g01908 795 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Adu08g01908 795 SUPERFAMILY Protein kinase-like (PK-like) 498 765 IPR011009 -
Adu08g01908 795 CDD PAN_AP_plant 334 419 - -
Adu08g01908 795 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Adu08g01908 795 Pfam PAN-like domain 339 403 IPR003609 -
Adu08g01908 795 Pfam Protein tyrosine and serine/threonine kinase 621 749 IPR001245 GO:0004672|GO:0006468
Adu08g01908 795 Pfam Protein tyrosine and serine/threonine kinase 515 608 IPR001245 GO:0004672|GO:0006468
Adu08g01908 795 Gene3D - 16 149 IPR036426 -
Adu08g01908 795 Gene3D Phosphorylase Kinase; domain 1 480 587 - -
Adu08g01908 795 ProSiteProfiles Protein kinase domain profile. 512 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01908 795 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Adu08g01908 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 183 IPR036426 -
Adu08g01908 795 Pfam D-mannose binding lectin 71 177 IPR001480 -
Adu08g01908 795 SMART ntp_6 338 418 IPR003609 -
Adu08g01908 795 Pfam Domain of unknown function (DUF3403) 750 795 IPR021820 GO:0004674
Adu08g01908 795 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01908 Adu-Chr8 31657271 31660447 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01908 437 771 Receptor kinase-like Gene Family AT4G05200 44.324 8.46e-91 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01908 PK_Tyr_Ser-Thr 2.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01908 - - ahf:112769704 1013.45