Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01907 ATGATGAACAATCTTCCATTTCTCTTCGTCCTTACAGGGATGGTTCTTCCTTTATTATTCTTTCCTCGTGATGTCTCAAGCGCAACGGATTCAATATCTATGGTTCAGCCTCTTCATGAAGGAAACACATTGGTTTCTAGTAATGGAACTTTTGAAATGGGGTTTTTCAGCCCAGGAAGTTCTTCAAACCATTACTTAGGTATTTGGTACAAGATTCTCCCGTTGAAAACCGTTGTTTGGGTTGCAAATAGATCCAACCCTGTCAAAGACAACACTAGCATACTCCACATAAACAACGAAGGGATTCTTCAACTTGTCAACAAGGACGGAACCGTCTTTTGGTCTACAAACTCCACCACAAAGATGAACCTTTCGAATCCGATTGCTCAGCTCTTAGATTCTGGAAATCTTGTTATTAGAGATGAGAATGACGAACAAGATTCCATGAACTACGTCTGGCAAAGCTTTGATTATCCTTGTGATACACTCTTACCGGGGATGAAGCTCGGTTGGGATCTGAAAACCGGTCTTGAACGGCGGTTAACTGCTTGGAAGAATTGGGACGATCCCTCGCCGGGGAATCTTTCTTGGGGAATCTCGCTCGAGGGTTTTCCCCAAGGAATATTCATGAAGGGATCGAAAGAGTACTACCGTGTCGGTCCATGGAATGGTCTTCGTTTCAGTGGAACACCTGAATTGATGCCCAATAACCTTTTTAGTTATAAATTCGTGTCGAACGAAAATGAAGTGTATTTTGTGTATAATAAGTATAATCTTGAAAATAAGTCATCACTTTTACTGAGACTCGTCATGAACGAAACCTTAGGTAACAGACACGGCTACATGTGGAACGACGGATCTTCGGGTTGGACGGAATTTTCTTCCCATTCGCCGAGAGAAGCGTGTGATCTCTATAATCACTGTGGTCCAAATGCGTATTGCAGCATCATAAGTGGCGGTTCAACGTGCCAGTGTCTGAAGGGGTTCAAGCAAAAGTCATCACAAAACTGGACTGAAGGATGTTCTTCTTCATTGCTTGATGAGCAATCGAGATGCAACATGGATAATAAGACGGGTAGTCAGAGAGATGATAAGAATGGGTTTTCTAAAGTTGGAGGAATGAAATACCCAGATACTCGGCGTTCTTGGGTGAATGAGAGTATGAATCTTGATGAATGCAGGGATAAATGCAGAGAGAATTGTTCGTGTATGGCTTATGCAAACTCAGATATTAGAGAAGGTGGTAGTGGCTGTTTGATGTGGTTCGGTGTTCTCGACGATATCAAAGAGTTTTCTGATGGCGGTGCTGATATATACATTCGAACTATCATCGATGGGAAGGAAGGGCACAAAAAGAAGAAGGTAGGACTGATAGTCACCGGTACCAGTGCCTCTGTTCTTGTGGTGCTTCTGATTTTTGGTTACATTGGCCAGAGAATAATAAACTGCAGAGTTAAGAAGAATAATGATGCATATGAAGACTACTTGGATCTTCCTATCTTTGACCTTGCTACAATTGCAAAAGCAACTGAAGACTTTTCCATTAGTAATAAACTTGGAAAAGGTGGATTTGGGACTGTATATAAGGGAACTCTAGTTGATGGACAAAATATTGCTGTGAAGAGACTTTTACAGGGATCTAATTCTGGACAAGGGTTGACAGAATTTATGAATGAAGTTTTATTAATTGCTAAACTTCAACATCGCAATTTAGTGAAGCTTCTTGGTTGTTGCATTCAAGATGGAGAAAAGATGCTTGTCTATGAATACATGCCCAATAAGAGCCTAGACAATTTTATCTTCGGTCACAAGGATGGTAGAGTTATTTTAGATTGGCCTAACCGATTCAACATTATATGTGGAATTGCTCGAGGATTACTTTATCTTCATCAAGATTCTCGATTAAGAATTATACATAGAGATCTCAAAGCTAGCAATGTATTGCTTGACAAAGAATTAAACCCTAAAATTTCTGACTTTGGGATGGCAAAATCATTTGGAGGAAATCAAACTGAAGGAAATACAAATAGAATTGTTGGAACATATGGTTATATGGCTCCTGAATATGCTATTTATGGATTATTCTCAATAAAATCTGATGTATTTAGCTTTGGAGTATTAATTTTGGAAATAGTAAGTGGAAGAAAGAATAGAATGATTTCTCGTGAAAATGAAGATGCAAATCTTATTGCACAAGCTTGGACATTATGGAAAGAAAAGAAGGCTCTATACTTAATTGATTCATGCATGGAGAATTCTTATGTTGAATTAGAAGCATTGCGTTGCATCCACACCGGTCTCCTATGTGTGCAACAAAATCCTGAGGATAGACCAAATATGTCAAATGTGGTGATGATGTTGGGTAGTGAGGTTGCCTTGCCCCAACCTAAGGAGCCTTCTTTCCTCACTGAGACTTCTCTTCTTCAAGCAGTTGATTCTTCGAGCTACCAACAATGTTTTTCAACTAATGAAATAAGTGTTACAGTATTGGAAGCCCGATAA 2502 0.3953 MMNNLPFLFVLTGMVLPLLFFPRDVSSATDSISMVQPLHEGNTLVSSNGTFEMGFFSPGSSSNHYLGIWYKILPLKTVVWVANRSNPVKDNTSILHINNEGILQLVNKDGTVFWSTNSTTKMNLSNPIAQLLDSGNLVIRDENDEQDSMNYVWQSFDYPCDTLLPGMKLGWDLKTGLERRLTAWKNWDDPSPGNLSWGISLEGFPQGIFMKGSKEYYRVGPWNGLRFSGTPELMPNNLFSYKFVSNENEVYFVYNKYNLENKSSLLLRLVMNETLGNRHGYMWNDGSSGWTEFSSHSPREACDLYNHCGPNAYCSIISGGSTCQCLKGFKQKSSQNWTEGCSSSLLDEQSRCNMDNKTGSQRDDKNGFSKVGGMKYPDTRRSWVNESMNLDECRDKCRENCSCMAYANSDIREGGSGCLMWFGVLDDIKEFSDGGADIYIRTIIDGKEGHKKKKVGLIVTGTSASVLVVLLIFGYIGQRIINCRVKKNNDAYEDYLDLPIFDLATIAKATEDFSISNKLGKGGFGTVYKGTLVDGQNIAVKRLLQGSNSGQGLTEFMNEVLLIAKLQHRNLVKLLGCCIQDGEKMLVYEYMPNKSLDNFIFGHKDGRVILDWPNRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKELNPKISDFGMAKSFGGNQTEGNTNRIVGTYGYMAPEYAIYGLFSIKSDVFSFGVLILEIVSGRKNRMISRENEDANLIAQAWTLWKEKKALYLIDSCMENSYVELEALRCIHTGLLCVQQNPEDRPNMSNVVMMLGSEVALPQPKEPSFLTETSLLQAVDSSSYQQCFSTNEISVTVLEAR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01907 833 ProSiteProfiles PAN/Apple domain profile. 352 443 IPR003609 -
Adu08g01907 833 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Adu08g01907 833 Pfam Protein tyrosine and serine/threonine kinase 515 786 IPR001245 GO:0004672|GO:0006468
Adu08g01907 833 Gene3D - 24 156 IPR036426 -
Adu08g01907 833 Pfam D-mannose binding lectin 77 185 IPR001480 -
Adu08g01907 833 Gene3D Hepatocyte Growth Factor 360 434 - -
Adu08g01907 833 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Adu08g01907 833 CDD B_lectin 35 159 IPR001480 -
Adu08g01907 833 Pfam S-locus glycoprotein domain 217 332 IPR000858 GO:0048544
Adu08g01907 833 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 16 831 - -
Adu08g01907 833 Gene3D Phosphorylase Kinase; domain 1 478 590 - -
Adu08g01907 833 Gene3D Transferase(Phosphotransferase) domain 1 591 796 - -
Adu08g01907 833 ProSiteProfiles Protein kinase domain profile. 513 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01907 833 SMART ntp_6 363 442 IPR003609 -
Adu08g01907 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 190 IPR036426 -
Adu08g01907 833 PANTHER - 16 831 - -
Adu08g01907 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Adu08g01907 833 CDD STKc_IRAK 519 787 - -
Adu08g01907 833 PIRSF SRK 1 833 IPR024171 GO:0004674
Adu08g01907 833 Pfam Domain of unknown function (DUF3403) 790 833 IPR021820 GO:0004674
Adu08g01907 833 Pfam PAN-like domain 364 427 IPR003609 -
Adu08g01907 833 SMART blect_4 35 159 IPR001480 -
Adu08g01907 833 CDD PAN_AP_plant 360 442 - -
Adu08g01907 833 SMART serkin_6 513 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01907 833 SUPERFAMILY Protein kinase-like (PK-like) 493 787 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01907 Adu-Chr8 31633448 31637900 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01907 455 815 Receptor kinase-like Gene Family AT4G23190 50.407 2.13e-118 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01907 PK_Tyr_Ser-Thr 7.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01907 - - qsu:112016032 926.006