Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01900 ATGGACCTGCTTCTCCTCACTCTTCATCTTCTTCTCTTACCCTTCACAACATCACAACAACAGAACCAAAACTACCCTTCTTCTGGGACACAAAGAAACGATACCTACTGTGACTACCCTTCAGTTTGTGGACCAAATGGGAACTGTGACATTAATCAATCACCAGCATGTTTCTGTTTGGATGGTTTCACACCTAAGTCACCGAGTGGTTACAGTTCAATGGATTATACACAGGGCTGTGTTAGAAACAAGGCTTTGAATTGTAGCACTGACGTGTTTGTTGCTTATTCTGTGTTCAAGGAACCAAGTGGCGGCTACTCTTTGTTGAACCAAAGATTGGGAGCGGAAGGTTGCAAGGGAAGCTGCAAGAGTAATTGTTCTTGCATGGCTTATTCTGTAACTGGGAGTGCATGCAAATTGTGGAGTGGTGATTTGTTTGATGTTAGGTTGGTTAAGGAAGGTGGTCAAGCTCTTTATATTCGAATGTCAGCTTCAGAGGAACACAAATCTGGAGGGGGAAATCACAAGAAGATAGTTGGAATAATAGTAGGAAGCACAGTTGCTACAGTTTCTGGAATGATAATGATATTGGCCTGTTGTTACATATTCAGAAAAAGAAGAAAGAAGTTAGAAGATATGAGATTGAGAGCTAGTGAGATTGTTGATCAAATCAATGAATATGAAGAAGGAGATATAGAGCTTCCATTTCTTGACCTATCAAGAATAGTTGAAGCCACTGGTAATTTTGCAATGGGAAACAAGTTAGGGGAAGGTGGTTTTGGACCTGTGTACAAGGGGACATTAGATGATGGTCGTCAAATCGCGGTAAAGAAGCTTTCGAGTAGTTCTGGGCAGGGGATAAATGAATTCAAGAATGAAGTACTACTCATAGCCAAACTTCAACACCGAAATCTTGTAAGGCTTCTCGGATGTTGCATCGAAGATGAAGAGAAACTGCTGATATATGAGTACATGCCTAATAAAAGCTTAGACGGCTTTATTTTTGGTCAGGATCCATTAAGCTACCCTGTAAATATCAAACACGGAGAAAATTATTGGATTGGCCTAAGCGTTTCAACATCATTTGTGGGATTTCTAGAGGCCTACTTTATCTTCACGAGGATTCTAGGTTGA 1134 0.4065 MDLLLLTLHLLLLPFTTSQQQNQNYPSSGTQRNDTYCDYPSVCGPNGNCDINQSPACFCLDGFTPKSPSGYSSMDYTQGCVRNKALNCSTDVFVAYSVFKEPSGGYSLLNQRLGAEGCKGSCKSNCSCMAYSVTGSACKLWSGDLFDVRLVKEGGQALYIRMSASEEHKSGGGNHKKIVGIIVGSTVATVSGMIMILACCYIFRKRRKKLEDMRLRASEIVDQINEYEEGDIELPFLDLSRIVEATGNFAMGNKLGEGGFGPVYKGTLDDGRQIAVKKLSSSSGQGINEFKNEVLLIAKLQHRNLVRLLGCCIEDEEKLLIYEYMPNKSLDGFIFGQDPLSYPVNIKHGENYWIGLSVSTSFVGFLEAYFIFTRILG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01900 377 Coils Coil 210 230 - -
Adu08g01900 377 SMART tyrkin_6 249 372 IPR020635 GO:0004713|GO:0006468
Adu08g01900 377 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 337 - -
Adu08g01900 377 ProSiteProfiles Protein kinase domain profile. 249 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01900 377 Pfam PAN-like domain 88 148 IPR003609 -
Adu08g01900 377 PANTHER - 21 337 - -
Adu08g01900 377 Pfam Protein tyrosine and serine/threonine kinase 251 335 IPR001245 GO:0004672|GO:0006468
Adu08g01900 377 ProSiteProfiles PAN/Apple domain profile. 88 163 IPR003609 -
Adu08g01900 377 CDD PAN_AP_plant 86 161 - -
Adu08g01900 377 Gene3D Phosphorylase Kinase; domain 1 209 324 - -
Adu08g01900 377 SUPERFAMILY Protein kinase-like (PK-like) 232 358 IPR011009 -
Adu08g01900 377 SMART ntp_6 88 162 IPR003609 -
Adu08g01900 377 Pfam S-locus glycoprotein domain 28 67 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01900 Adu-Chr8 31515809 31523387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01900 179 339 Receptor kinase-like Gene Family AT4G23190 45.342 2.90e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01900 PK_Tyr_Ser-Thr 5.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01900 - - adu:107462470 398.282