Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01899 ATGGCAAACTCTTTCTTTAATATGCCAATTTCCGTCATCACTTTCTTCTTCTTCTTCTTCTTCTTCTACCTCCTTCTCTTTACCAGTGCTGCAAACAACACCATAACTCACTCCCAGTCTCTAACCGAAAACCAAACCTTACTTTCCATCAACACAACCTTCCAACTTGGTTTCTTCACTCCTAACAACTCTAAAAACCGCTACCTCGGCATATGGTACAACAATCTCCCGGTTCAAACCGTGGTATGGGTCGCCAACCGAGAGAAACCAATCACAACAAACATCCCTTCTGTTTTGAAGATAAACACCACACAAAACAGCACCACCCTTGTCGTCCTCCAGGACAACTCTGTTATATGGTCTACACCGCCGTCAAGACGCGCTTCGAATCCGGTTCTTCAGCTACTGGACTCAGGGAACCTTGTTTTGAGAGAACAAGATGATAAAAATGAAAAGAACTATTTATGGCAGAGTTTTGATTACCCTTCTGACACGCTTCTTTCAGGGATGAAGCTAGGGAAGAACTTGAAAACCGGCCTGGATCGACGCGTGACCGTGTGGAAAACCGTGGATGATCCTTCACTGGGAAACTTAACTTGGATGATGGAAGTTACAACCTGGCCACACCCAATACAAACAACAGGATCAAAGAAACAATTCGACAGTGGACCGTGGAATGGATTGGTCTACAGCAGCATGCCCACCAGAATTCGCCAACCAACTTTCGATTATGTCTATGTCTCCAATGAGGATGAAGTTTACTTCATGTTCCATCTTGTTAACAACTCTGTTCCAACAAGAATGGTGCTGGATGCAACTTCTTACAAGCGTCAGTACTCGGTTTGGGACTACGGTTCGCAAGAATGGAAGGTTTATAACTCGCTGCCGCGAGATTTTTGCGAGCAATACGGCGTTTGCGGCCCCAATGGGAACTGTGATTTGTCAAAGGTGCCTGCTCAGGCATGTGATTGTTTGAGAGGGTTTAGGCCCAAGTCGCCGGAAGAATGGAATCGACAGAACCGATCTGACGGTTGCTTGCGCGACAAGCCACTGAATTGCGGAGGCGATAAGTTTGTGAAGTATGAAAAGATGAAAGTGCCTGATACTGTGAATTGTTGGTACCTGAATGAGAGCATGAATCTTGATGAGTGCAGAACGAAATGTTTGGGGAATTGTTCTTGTGTGGCTTATACAAATTCGGATATTAGAGGTGAAGGTAGTGGCTGTGCTTTGTGGTCTGGTGATCTTTATGATTTGAGGATTTTACCAGATGCAGGCCAAGATTTGTACATTAGAGTGCCAGCTTCAGAGTTAGAGTCAAACAATGGACGCAAGGTCAAGATAGGAGTTGGTGTTGGAGTCTCAGTTGGCGTTTTATGTGGCCTTCTCTTAGCATTCTGTTTGATATGGAAAAGGCGAAAAAGGGCCACTCTGAAAGATCATGTAGAGACTAATGCAGCATTAAAGGATCAGTCCAAGGAAGAACAAGAGGAAGATCCAGAGGTTCCATTATATGACCTATCAGTTATAGCTTCTTCCACTGATAACTTTTCAGATAAAAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTGTTTAAGGGAACATTAGAAAATGGGCAAAGAATTGCAGTTAAGAGACTCTCAGTTAGTTCCGGACAAGGGATCAAGGAATTTAAGAATGAAATTGCCTTGATAGCCAAACTTCAGCATCGTAATCTTGTAAAACTTCATGGATATTGCATTCAAAATGAAGAGAAATTACTTATATACGAATATATGCCTAATAAAAGTTTGGACTTCTTTATATTTGATCAAACGCAAAGAACAGTATTGGATTGGCCAAGACGATTTCATATAATTTGTGGCATTGCAAGAGGTCTTCTTTATCTTCATCAAGATTCAAGACTTAGAATAATTCATAGAGATCTTAAAGCAAGTAATGTTTTACTAGACGATGAGATGAATCCTAAAATCTCAGACTTTGGATTAGCTAGAATTTTGGGAGGAGACCAAACTGCAGATTCTACACGTCGGGTGGTTGGAACTTATGGATACATAGCACCAGAATACGCGATAGATGGAAACTTCTCAATAAAATCAGACGTGTTTAGCTTTGGTGTTTTGCTGTTGGAGATAATATCAGGAAGGAAAAACAGAGAACACAATCAAAAAGAAAGTACAAGCCTTATTGGACATGCATGGAATTTGTGGATACAAGAGAGGCCATTGGACTTGGTTGGTGAATACCTGAAAGAATCTTGTAATGCTTCTGAAGTATTGCGTTGCATTCATATTAGTTTCCTGTGTCTGCAGCAGCATCCACATGACAGGCCAGAGATGTCATCTGTAATTTTGATGTTAGGTAGTGAAATTGGTTTGCCTAAGCCAAAACAACCAGCTCTATTTGTTAGAGAATATTCTTCTTCTAATAAGGAGTATTCTTCATCAAATAAGAGTAATTTAGCTTCTGTCAATGAATTAAGTATCTCCAATGTAGAAGCTCGTTAG 2508 0.4127 MANSFFNMPISVITFFFFFFFFYLLLFTSAANNTITHSQSLTENQTLLSINTTFQLGFFTPNNSKNRYLGIWYNNLPVQTVVWVANREKPITTNIPSVLKINTTQNSTTLVVLQDNSVIWSTPPSRRASNPVLQLLDSGNLVLREQDDKNEKNYLWQSFDYPSDTLLSGMKLGKNLKTGLDRRVTVWKTVDDPSLGNLTWMMEVTTWPHPIQTTGSKKQFDSGPWNGLVYSSMPTRIRQPTFDYVYVSNEDEVYFMFHLVNNSVPTRMVLDATSYKRQYSVWDYGSQEWKVYNSLPRDFCEQYGVCGPNGNCDLSKVPAQACDCLRGFRPKSPEEWNRQNRSDGCLRDKPLNCGGDKFVKYEKMKVPDTVNCWYLNESMNLDECRTKCLGNCSCVAYTNSDIRGEGSGCALWSGDLYDLRILPDAGQDLYIRVPASELESNNGRKVKIGVGVGVSVGVLCGLLLAFCLIWKRRKRATLKDHVETNAALKDQSKEEQEEDPEVPLYDLSVIASSTDNFSDKNKLGEGGFGPVFKGTLENGQRIAVKRLSVSSGQGIKEFKNEIALIAKLQHRNLVKLHGYCIQNEEKLLIYEYMPNKSLDFFIFDQTQRTVLDWPRRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDEMNPKISDFGLARILGGDQTADSTRRVVGTYGYIAPEYAIDGNFSIKSDVFSFGVLLLEIISGRKNREHNQKESTSLIGHAWNLWIQERPLDLVGEYLKESCNASEVLRCIHISFLCLQQHPHDRPEMSSVILMLGSEIGLPKPKQPALFVREYSSSNKEYSSSNKSNLASVNELSISNVEAR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01899 835 Pfam S-locus glycoprotein domain 221 332 IPR000858 GO:0048544
Adu08g01899 835 Pfam PAN-like domain 353 419 IPR003609 -
Adu08g01899 835 ProSiteProfiles Protein kinase domain profile. 517 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01899 835 SMART ntp_6 353 433 IPR003609 -
Adu08g01899 835 Gene3D Transferase(Phosphotransferase) domain 1 593 792 - -
Adu08g01899 835 SMART blect_4 38 162 IPR001480 -
Adu08g01899 835 Gene3D - 26 159 IPR036426 -
Adu08g01899 835 ProSiteProfiles PAN/Apple domain profile. 353 434 IPR003609 -
Adu08g01899 835 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 21 833 - -
Adu08g01899 835 CDD B_lectin 38 162 IPR001480 -
Adu08g01899 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 193 IPR036426 -
Adu08g01899 835 PIRSF SRK 5 835 IPR024171 GO:0004674
Adu08g01899 835 SMART serkin_6 517 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01899 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Adu08g01899 835 CDD STKc_IRAK 523 787 - -
Adu08g01899 835 ProSiteProfiles Bulb-type lectin domain profile. 32 156 IPR001480 -
Adu08g01899 835 SUPERFAMILY Protein kinase-like (PK-like) 500 804 IPR011009 -
Adu08g01899 835 Pfam D-mannose binding lectin 80 188 IPR001480 -
Adu08g01899 835 Pfam Protein tyrosine and serine/threonine kinase 520 784 IPR001245 GO:0004672|GO:0006468
Adu08g01899 835 Gene3D Phosphorylase Kinase; domain 1 477 592 - -
Adu08g01899 835 PANTHER - 21 833 - -
Adu08g01899 835 Coils Coil 478 498 - -
Adu08g01899 835 CDD PAN_AP_plant 350 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01899 Adu-Chr8 31482817 31486412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01899 462 835 Receptor kinase-like Gene Family AT4G23150 50.396 1.95e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01899 PK_Tyr_Ser-Thr 8.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01899 - - ahf:112769120 1635.93