Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01898 ATGTTTGTGGAAGCTTCTTCCTCTAATTCTTCATCTTCTGGTTTAAATAAAAATGATAGCACCACCATATGTGACCAATACAGTAGAGTGTGTGGACCAAACGGGAACTGCGATGAGGCAAAAACTTGTGTTTGCTTGGATGGTTTCACACCTAAGTCCCCAACTGATTATGCTTATTACTTGAACTTTACACAGGGATGTGTGAGAAACAAACCTTTGAATTGTAGCACTGACGTGTTTGTTAGATATTCTTCTCTTAAAGAACCCAGTGGTGGTTATTCTTTGTCCAACCAACAGGATTGCATGGGAAAATGCAAGAGCAACTGTTCTTGTATGGCGTATAACGTAATTTTGGGTGGATGCAAATTGTGGAATGGTGATTTGTTTGATGTTAGGTTGGTCAAGCAAGGTGGACAAGATCTTTATATTCGAATGGCAGTTTCAGAGGAACAAGAGAAGTCAGGAGGGAGAAAACATGGACGAAAGGAGGGAGCGGTGGTTGGAATAGTTGTCGGGAGCACTATTGTGATTTCCATGATAATTATCGCTTCATGGTACATGCTTAGGAAAAAAACAGCATCAAAAGCATTGGAACGTTTAAGGATTGATGAGCTTGTTACTCATCGCACCAATGTACAAAAGGAAGATATGGGGCTTCCATTATTTGATCTATCAACAATAGCAATGGCCACTAATAATTTCTCCCCAAACAATAAACTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGTATATTAGAAGATGGACAACAAATTGCTGTCAAGAGGCTTTCAAGTAGTTCTGGACAGGGTTTAAATGAATTTAAAACCGAAGTAAAGCTGATAGCTAGACTTCAACACCGGAATCTTGTAAAGCTTTTCGGATGTTGCATTCAAGAAGAGGAGAAATTACTAATATATGAATACATGCCTAATAAAAGCTTGGACTATTTTATTTTTGATCAAGAACGAAGGAGTACTTTAGATTGGTCCAAGCGCTTTAACATTATTAGTGGAATTGCTAAAGGCTTATTGTATCTTCATCAAGATTCAAGGTTAAGGATTATACATAGAGATCTTAAAACAAGTAATATTTTATTAGACATTAAGATGGAACCCAAAATATCAGATTTTGGTCTAGCTAGAACTTTTGGAGGTGATCAAAGTAAAGCAAATACAAGGAGAATTGTCGGAACTTTCGGATACATGGCTCCAGAATATGCTGTTAATGGACTGTTTTCGATAAAATCTGACGTCTTTAGCTTTGGCATTTTATTACTTGAGATAGTATCTGGAAAGAGAAATAGAAGATTATTTTATGCAAGTGACAATGATGAAAGCTTGTATGAAAACGCGTGGGATTTATGGAAGCAAGGAAGGTCACTGGAGTTGGTGGATGAATGCCTGAAAGATTCATGGAATTTGAGTGAAGTACAACGTTGTATTCATATTGGCCTCCTATGTGCACAGCAATATCCACATGATAGGCCAACAATGTCTTCTGTGGTTTTAATGTTGGGAAGCGAAGTTGATTTGCCTCAACCCAAAGCTCCTACATTTTTCTTGTGTGAACCTTTTGATGGTTCCAGTTCCAGTACTTGTAAAAACGAATTAAGCATTACAGAGATGGAAGCTCGGTAA 1641 0.3784 MFVEASSSNSSSSGLNKNDSTTICDQYSRVCGPNGNCDEAKTCVCLDGFTPKSPTDYAYYLNFTQGCVRNKPLNCSTDVFVRYSSLKEPSGGYSLSNQQDCMGKCKSNCSCMAYNVILGGCKLWNGDLFDVRLVKQGGQDLYIRMAVSEEQEKSGGRKHGRKEGAVVGIVVGSTIVISMIIIASWYMLRKKTASKALERLRIDELVTHRTNVQKEDMGLPLFDLSTIAMATNNFSPNNKLGEGGFGPVYKGILEDGQQIAVKRLSSSSGQGLNEFKTEVKLIARLQHRNLVKLFGCCIQEEEKLLIYEYMPNKSLDYFIFDQERRSTLDWSKRFNIISGIAKGLLYLHQDSRLRIIHRDLKTSNILLDIKMEPKISDFGLARTFGGDQSKANTRRIVGTFGYMAPEYAVNGLFSIKSDVFSFGILLLEIVSGKRNRRLFYASDNDESLYENAWDLWKQGRSLELVDECLKDSWNLSEVQRCIHIGLLCAQQYPHDRPTMSSVVLMLGSEVDLPQPKAPTFFLCEPFDGSSSSTCKNELSITEMEAR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01898 546 Gene3D Phosphorylase Kinase; domain 1 192 309 - -
Adu08g01898 546 CDD STKc_IRAK 240 506 - -
Adu08g01898 546 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 539 - -
Adu08g01898 546 SMART serkin_6 234 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01898 546 Gene3D Transferase(Phosphotransferase) domain 1 310 513 - -
Adu08g01898 546 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 539 - -
Adu08g01898 546 ProSiteProfiles Protein kinase domain profile. 234 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01898 546 ProSiteProfiles PAN/Apple domain profile. 75 146 IPR003609 -
Adu08g01898 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Adu08g01898 546 SUPERFAMILY Protein kinase-like (PK-like) 217 523 IPR011009 -
Adu08g01898 546 CDD PAN_AP_plant 72 146 - -
Adu08g01898 546 Pfam Protein tyrosine and serine/threonine kinase 237 503 IPR001245 GO:0004672|GO:0006468
Adu08g01898 546 Pfam PAN-like domain 75 131 IPR003609 -
Adu08g01898 546 SMART ntp_6 75 145 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01898 Adu-Chr8 31474419 31476846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01898 166 520 Receptor kinase-like Gene Family AT4G23230 54.342 2.12e-128 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01898 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01898 - - aip:107610641 785.793