Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01897 ATGGGAAACTTCATTATTACTATTATACCAATTATCAGTTTCTACCTTCTTCTCTTTCAAATCTCCCAAACAATTGCAGAAACTGATACCATCACTCACTTCCACTCTCTAAGTAAAAACCAGACCTTAGTTTCCAAGACCGGACAATTTGAGCTTGGTTTCTTCACTCTTGATAATTCCACCAACCGTTATTACCTTGGCATATGGTACAAAAATATCCCAGGTCAAACCATTGTATGGGTCGCAAACCGCGAAAAACCCGCCACCAAACCCAACTCTCTTCTATTCATCATAAACAACACAACAGAGAACACACTACTCCTTAGTCAAGACAACAACACTGTTCTATGGTCTGTGAGCGTATCAAGACAACCCAAGAATCCAATCCTGCAGCTCTTGGATTCAGGGAACCTTGTTCTGACGGAAGAAAAGAATTATCTATGGCAAAGCTTTGATTACCCTGGTGATACTCTCTTGCCAGGGATGAAGCTTGGTAAGGATTTGAAGACTGGTTTCGATAGGCGCGTAACTGCATGGAAGAATAACAAAGATCCTTCTCCAGGAACGTTAAATTGGGGAATGGATGTGACTAAGTGGCCAGAACCAATGCAGAGAATAGGATCAATGAAACAGTTCAACTCTGGACCATGGATTGGAGTGGGTTATGGTAGCAAACCAACCATAAAGCGCCAAGCATTTTTCAGCTTAGTTTTTGTCTCTAATGAGGATGAAGTGTACTTTGCATTCCACCTTGATAACAACTCTGTTCCCGTGAGGATGGTGTTGGATCAAGCCACCTACAAGCGTCTGTATTTTGTTTGGATTGATTCTGACCAACAATGGCAGGTCTATGTTTCCCTGCCAAGAGACTCTTGCGAGCGATATAGTGTTTGTGGTCCTAATTCCAATTGTGATTGGAACACGTCCGCAGTTGATGCTTGTGCTTGTTTGAGAGGGTTCAGGCCTAACAGCGCAGGCGGTTGCTTGCGCGACAAGCCGCTACAATGTGAAAGTGATGAGTTTGTTAAGTATGAGAAGATGAAAGTACCGGACACTGAGAATTGTTGGTACTTGAATCAGAGCATGAACCTTGTTGACTGCAGAGACAAATGCTTGATGAATTGTTCTTGTGTTGCTTATGCGAATTCGGATATTAGAGGTGAAGGTAGTGGTTGTGCTTTGTGGTTTGGTGATATTAATGACTTGAGGATTCTACCAGATGCAGGCCAAGATCTTTATATTAGAGTTCCTGCTTCAGAGTTAGAGAGAAACAACGGACGCAATGTCAAAATTGGAGTTGCAGTTGGAGTCACAATTGGCGTATTATGTGGCCTTCTCTTAGCTTTGTGTTTGATATGGAAAAGAAGGAAAAGGGCCATTCTGAAAGAGGCTATTGTAGCATTCGTGGATCATTCCGAGGAAGACACAGAGGTTCAATTCTATGACCTATCAGTTATAGCTTCCTCCACAGATAACTTTTCTGATAAAAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTCTTCATGGGAACATTGGAAAATGGACAAAGAATAGCAGCTAAGAGGCTTTCAATTGGTTCTGGACAAGGGGCCGAGGAATTTAAGAATGAAATTGCATTGATTGCTAAACTTCAGCATCGTAATCTTGTCAAACTAAAAGGATATTGTATTCAGAATGAAGAGAAATTACTTATATATGAATACATGCCTAATAAGAGTTTGGATTTCTTTATATTTGTAGATCAAACACAAAGAATGCTTTTGGATTGGCCTACAAGATTCGATATAATATGTGGGATAGCGAGAGGCCTTCTTTATCTTCACCAAGATTCAAGACTTAGAATTATTCATAGAGATCTGAAAGCAAGTAATGTTTTACTTGACGATAAGATGAATCCAAAGATCTCAGATTTCGGTTTAGCTAGAATCTTGGGAGAAGACAAGACTGCAGAAATTACGCATCGCATTGTTGGAACATATGGATATATAGCACCGGAATATGCAATTGATGGAAACTTCTCAGTAAAATCAGACGTTTATAGCTTCGGTGTTCTCTCGTTGGAGATAGTATCAGGAAAGAAAAACACAGGAAGCCATGAAAAAGAAAATACAAACCTTACTGGACACGCATGGAATTTGTGGATGGAAGGGAGGCCTTTAGACTTGATTAGTGAAGACCTAAAAGAATCTTGCAATAGCTCTGAAGCATTGCGATGCATTCAAATTAGTTTTCTGTGTCTCCAACAGAATCCACATGAGAGACCAAGCATGTCATCTGTGGTTATGATGTTAGGTAGTGAAATTTGCTTGCCTCAGCCAAAACAACCAGCTCTTTTTGTTCGAGAATATTCTTCACCAAATAAGAGTAATTTACTTTCTACTAATGAATTAAGTATGTCAATTTTAGAACCACGTTGA 2418 0.4007 MGNFIITIIPIISFYLLLFQISQTIAETDTITHFHSLSKNQTLVSKTGQFELGFFTLDNSTNRYYLGIWYKNIPGQTIVWVANREKPATKPNSLLFIINNTTENTLLLSQDNNTVLWSVSVSRQPKNPILQLLDSGNLVLTEEKNYLWQSFDYPGDTLLPGMKLGKDLKTGFDRRVTAWKNNKDPSPGTLNWGMDVTKWPEPMQRIGSMKQFNSGPWIGVGYGSKPTIKRQAFFSLVFVSNEDEVYFAFHLDNNSVPVRMVLDQATYKRLYFVWIDSDQQWQVYVSLPRDSCERYSVCGPNSNCDWNTSAVDACACLRGFRPNSAGGCLRDKPLQCESDEFVKYEKMKVPDTENCWYLNQSMNLVDCRDKCLMNCSCVAYANSDIRGEGSGCALWFGDINDLRILPDAGQDLYIRVPASELERNNGRNVKIGVAVGVTIGVLCGLLLALCLIWKRRKRAILKEAIVAFVDHSEEDTEVQFYDLSVIASSTDNFSDKNKLGEGGFGPVFMGTLENGQRIAAKRLSIGSGQGAEEFKNEIALIAKLQHRNLVKLKGYCIQNEEKLLIYEYMPNKSLDFFIFVDQTQRMLLDWPTRFDIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDKMNPKISDFGLARILGEDKTAEITHRIVGTYGYIAPEYAIDGNFSVKSDVYSFGVLSLEIVSGKKNTGSHEKENTNLTGHAWNLWMEGRPLDLISEDLKESCNSSEALRCIQISFLCLQQNPHERPSMSSVVMMLGSEICLPQPKQPALFVREYSSPNKSNLLSTNELSMSILEPR 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01897 805 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Adu08g01897 805 PIRSF SRK 2 805 IPR024171 GO:0004674
Adu08g01897 805 SUPERFAMILY Protein kinase-like (PK-like) 475 789 IPR011009 -
Adu08g01897 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 185 IPR036426 -
Adu08g01897 805 CDD PAN_AP_plant 333 417 - -
Adu08g01897 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Adu08g01897 805 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Adu08g01897 805 SMART ntp_6 336 416 IPR003609 -
Adu08g01897 805 SMART serkin_6 493 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01897 805 CDD B_lectin 36 154 IPR001480 -
Adu08g01897 805 PANTHER - 29 802 - -
Adu08g01897 805 ProSiteProfiles Protein kinase domain profile. 493 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01897 805 Gene3D Phosphorylase Kinase; domain 1 467 568 - -
Adu08g01897 805 Pfam D-mannose binding lectin 77 180 IPR001480 -
Adu08g01897 805 Pfam Protein kinase domain 494 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01897 805 Pfam PAN-like domain 336 402 IPR003609 -
Adu08g01897 805 ProSiteProfiles Bulb-type lectin domain profile. 28 153 IPR001480 -
Adu08g01897 805 CDD STKc_IRAK 499 764 - -
Adu08g01897 805 Gene3D Transferase(Phosphotransferase) domain 1 569 770 - -
Adu08g01897 805 Gene3D - 22 151 IPR036426 -
Adu08g01897 805 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 802 - -
Adu08g01897 805 SMART blect_4 34 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01897 Adu-Chr8 31470320 31473383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01897 422 805 Receptor kinase-like Gene Family AT4G05200 48.756 1.80e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01897 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01897 - - ahf:112769120 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01897 08 31470320 31473383 Adu03g01624 03 26380282 26388715 PCT