Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01893 ATGTCCCATCCTGCGGTCTGGAATTGGAACTCATCACAACACCGAAAAAATAAAACGCAGATGATGGAAGTGGTTCTGAGTTTGATGCTAATTAGCAGTGCTAATTTTCTATTAACTGAAGAGAGCCAAAACGACAGCGTATCATCCTCTTCTGGAGGAAACGAAACCTACTGCGACTTCCCTGGAATTTGCGGACCCAATGGAAACTGCGATGTTAATAAGCCGCTAGCTTGTGGATGCTTGGATGGTTTCACACCCAAGTCTCCCACTGCCTTCGATAGCCTCGACTACACGCACGGCTGCGTCAGAAAGAAACCATTCAATTGTAGCACCGACGTCTTCGTTGCCTATGCTGTGTTCCAAGAACCCACTGGCACGTCTTATTATCATTCTTTCTTCAACCAAAGTTTGAAAGCCGAGGGTTGCAAGGAGAAATGCAAGAGTAACTGTTCTTGCATGGCGGCTTATACAGAAATTGAGAGTGGTGAATGCAAATTGTGGAGTGGTGATTTGTTTGACGTTAGGGTCATACAGGAAGGACGCCAATATCTTTATATTCGAATGCCTGCTTTTGACCAAGCAGAGCCCGGAGGCCGAAGTCACCGGCGCAGCGACCATAAGGTGGTGGGAGTAGTTGTTGGCAGTGCTGCTGTTGTGATTTTGGGTATGATCTTGGCTTCTTGGTACATGCTCACCAAAAAAACAGAGCCACAAGCATTGGAAGAAGTAAGGATTGGTGAGATGCTTAGTCAGGCCAATGAACAAGAAGGGGATCTGGAGCTTCCATTACTTGACCTATCAAGAATAGCTATGGCTACTGATAACTTTTCTCTCAATAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGCGTATTAGATGATGGACAACAAATTGCTGTAAAGAGACTTTCAAGAAGTTCTGGACAGGGTTTAAATGAATTTAAAACTGAGGTCAAACTAATAGCCAAACTTCGACACCGTAATCTTGTAAAACTTCTTGGTTGTTGCATTCATGAGGAAGAGAAATTGTTGGTATATGAATACATGCCTAACAGAAGTTTAGACTATTTTATTTTTGATCAAATGCGAAAGAAGACTTTGGATTGGCCTAAGCGCTTTAACATCATTTGTGGAATTGCTAGGGGCTTATTATATCTTCATCAAGATTCAAGACTAAGGATTATACATAGAGATCTTAAAGTAAGTAATGTTCTATTAGATAGTAAAATGAACCCAAAGATTTCAGATTTCGGTTTAGCTAGAAGTTTTGGAGGGGATCAAAGTAAAGGAAATACACATAGAGTAGTGGGAACTGTTGGATACATGGCACCTGAATATGCTGTTCATGGAAATTTTTCGGTAAAATCTGATGTCTTTAGTTTCGGTATTTTGCTACTCGAGATAATATCAGGAAGAAAAAATAGAAGATTTTATTATCCAAGTTCCAATGTCAACCTATATGGACATGCATGGGATCTATGGAAACAAGGAAGGTCATTAGAATTGGTGGATGAATGGTTGAAGGAGACATGGAATGTGTCTGAAGTGCAACGTTGCATCCACATCAGCCTCCTATGTGCACAACAGCATCCCCAAGATAGGCCAACCATGTCATCAGTGGTTCTCATGCTTGGAACTGAAATTGATTTACCTCAACCCAAATATCCTACGTTTTTTGTTGCTGAATCTTCTGAAGGCACAAGTTCCTCCTCTTGTAAAAACGAATTGAGCGTTACAGAATTGGAACCTCGATAA 1764 0.4133 MSHPAVWNWNSSQHRKNKTQMMEVVLSLMLISSANFLLTEESQNDSVSSSSGGNETYCDFPGICGPNGNCDVNKPLACGCLDGFTPKSPTAFDSLDYTHGCVRKKPFNCSTDVFVAYAVFQEPTGTSYYHSFFNQSLKAEGCKEKCKSNCSCMAAYTEIESGECKLWSGDLFDVRVIQEGRQYLYIRMPAFDQAEPGGRSHRRSDHKVVGVVVGSAAVVILGMILASWYMLTKKTEPQALEEVRIGEMLSQANEQEGDLELPLLDLSRIAMATDNFSLNNKLGEGGFGPVYKGVLDDGQQIAVKRLSRSSGQGLNEFKTEVKLIAKLRHRNLVKLLGCCIHEEEKLLVYEYMPNRSLDYFIFDQMRKKTLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKVSNVLLDSKMNPKISDFGLARSFGGDQSKGNTHRVVGTVGYMAPEYAVHGNFSVKSDVFSFGILLLEIISGRKNRRFYYPSSNVNLYGHAWDLWKQGRSLELVDEWLKETWNVSEVQRCIHISLLCAQQHPQDRPTMSSVVLMLGTEIDLPQPKYPTFFVAESSEGTSSSSCKNELSVTELEPR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01893 587 SMART ntp_6 109 188 IPR003609 -
Adu08g01893 587 Gene3D Phosphorylase Kinase; domain 1 239 351 - -
Adu08g01893 587 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 580 - -
Adu08g01893 587 Pfam PAN-like domain 109 174 IPR003609 -
Adu08g01893 587 CDD PAN_AP_plant 140 189 - -
Adu08g01893 587 ProSiteProfiles PAN/Apple domain profile. 109 190 IPR003609 -
Adu08g01893 587 Pfam Protein tyrosine and serine/threonine kinase 277 545 IPR001245 GO:0004672|GO:0006468
Adu08g01893 587 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 16 580 - -
Adu08g01893 587 SUPERFAMILY Protein kinase-like (PK-like) 261 566 IPR011009 -
Adu08g01893 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Adu08g01893 587 Gene3D Transferase(Phosphotransferase) domain 1 352 554 - -
Adu08g01893 587 SMART serkin_6 276 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01893 587 ProSiteProfiles Protein kinase domain profile. 276 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g01893 587 MobiDBLite consensus disorder prediction 567 587 - -
Adu08g01893 587 CDD STKc_IRAK 282 547 - -
Adu08g01893 587 Pfam S-locus glycoprotein domain 43 88 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01893 Adu-Chr8 31412652 31415754 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01893 204 563 Receptor kinase-like Gene Family AT4G23230 53.022 2.74e-127 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g01893 PK_Tyr_Ser-Thr 6.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01893 - - adu:107462470 1176.39