Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01887 ATGGCAGAAGATCAATTTCAGGCAAGTGGAAACTGGTGGGAGAATCCAGCTATTAGGAACAATTGGCAACCGCATCACCAACAACAAGATGAATCAGATCACATGATGAAACCGACAAGGGTTTCCATGGATTCCTCGGGTGGTGCCGGTGGCGGTTCGTCTTCTGTGGTGTTTCATGACCCACAGAAGCTTCAGCCTCCGGATTCCGCCACGGCCGCCACTTCTTCCACTGACCCCAACTTGCACTTTATGGCTTTAGGCCTCTCTTCCCCGCCCATCGATTGGAATCAACAACCATCCTTCTTGCGTGGTGAGAAGGGTGGAGAGAACAGCTTCAGGTCGATGCTACAAGAAGAGGGTGGCGGCGGCGGCGGCATGGGGTTGTCACCACAACAAGTCCATCAATGGAGATCACCGGAAACCGAATTCAAGAACAATAGAGGTTTCTGTTTGGAGCAAAACCAATTCAGTCCTCAATATAGCTCCGGTGACAGCACAGTAACAAGCCAACAAGGATTTCATCACCAAAACATGGATCATTCCGCAGTTCTATACGGTAGCCCTTCATCAATCTTACAAGGACTATTAGGACCTGATCATCATCACCATCATCATCAACAACAAGCTAATCATAATTTTTCATATCCAACTTCAAACTATGGGTTGAGTTCTTCTAGTAGCAATGACTTTGTGCCTTCTTCTTCTTCTTCTAATTGGTCTAATAACAACAATAATAATAATAATAACAATAAAGTGCCTCAGTTCTTGAGAGGCTCACCACCAAAACAGTTATCGAATTCGTCATCATCACCGATAACAACAACAAACACTAGTTTGCATTTCACAAACAACGCTCCTTTTTGGAACGCTGCTGCTGCTGCTGCTTCTGACCCGAAAGATGTTAGGTCCACCACCTTCTTCCCTAATTCATTGCAGCCACCATTCTTCACTAATCCAAGTTTTGATGTCCAATCTAAGAATATGAGTGAAATGAGGGATTCAGGTGCAGTGGTGAAGAAAAGTGGGAGTGAACCAACACCCAAAAGGCCTCGGAACGAAACTACCCCATCTCCTTTGCCAGCTTTTAAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTAGTGTCGCCTTTTGGAAAGACTGATACAGCCTCAGTGTTATCTGAAGCAATTGAATACATCAAATTCCTCCATGAACAGGTCACTGTTTTGAGTACCCCGTATATGAAAAGTGGAGCTCCTATACAGATTCAACAGGGTTCCGGTAAATCTAAGGAAGGTGAGGGTCCAAAACAAGATCTTAGAAGCCGAGGGCTATGCTTGGTGCCAGTTTCAAGCACATTTCCAATGACTCATGAAACCACAGTTGATTTTTGGACACCAACATTTGGAGGAGGTTCAAGATAG 1410 0.4496 MAEDQFQASGNWWENPAIRNNWQPHHQQQDESDHMMKPTRVSMDSSGGAGGGSSSVVFHDPQKLQPPDSATAATSSTDPNLHFMALGLSSPPIDWNQQPSFLRGEKGGENSFRSMLQEEGGGGGGMGLSPQQVHQWRSPETEFKNNRGFCLEQNQFSPQYSSGDSTVTSQQGFHHQNMDHSAVLYGSPSSILQGLLGPDHHHHHHQQQANHNFSYPTSNYGLSSSSSNDFVPSSSSSNWSNNNNNNNNNNKVPQFLRGSPPKQLSNSSSSPITTTNTSLHFTNNAPFWNAAAAAASDPKDVRSTTFFPNSLQPPFFTNPSFDVQSKNMSEMRDSGAVVKKSGSEPTPKRPRNETTPSPLPAFKKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQIQQGSGKSKEGEGPKQDLRSRGLCLVPVSSTFPMTHETTVDFWTPTFGGGSR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01887 469 Gene3D - 363 414 IPR036638 GO:0046983
Adu08g01887 469 MobiDBLite consensus disorder prediction 415 439 - -
Adu08g01887 469 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 46 457 - -
Adu08g01887 469 MobiDBLite consensus disorder prediction 1 25 - -
Adu08g01887 469 CDD bHLH_AtbHLH_like 363 406 IPR045239 -
Adu08g01887 469 MobiDBLite consensus disorder prediction 194 277 - -
Adu08g01887 469 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 349 398 IPR011598 GO:0046983
Adu08g01887 469 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 46 457 - -
Adu08g01887 469 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 364 415 IPR036638 GO:0046983
Adu08g01887 469 MobiDBLite consensus disorder prediction 321 360 - -
Adu08g01887 469 MobiDBLite consensus disorder prediction 209 277 - -
Adu08g01887 469 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01887 Adu-Chr8 31311416 31315381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01887 103 469 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 43.137 4.66e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01887 - - ahf:112772433 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01887 08 31311416 31315381 Adu08g01887 08 31311416 31315381 ECH