Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01843 ATGGCCCAAATCTATGGTGTTCTCAAACTTAGGATTCAGAGAGGCATTAATCTCGCAATTCGCGATTTGCGTTCTAGTGATCCTTATGTTGTTGTCAGCATGGGTACTCATCAGAAACTGAAAACTAGGATCATGCATAAAGATCTCAATCCTGAGTGGAATGAAGAATTGACCCTTATGGTTGACGATATTAAAACTCCAATACATCTGAAAGTTTTCGACAAAGACATGTTCTCAGCAGATGATGAAATGGGTGAAGCAGTTATAGATATAAGGTCATATGTTAAGTGCTGGAACAAAGGATTGGAAAAACTCCCAGATGGTTGTGTAGTGAAAAGAATTCAGCCAAATGAAAATAACTATCTTGCAGAAGAGAGTCCCTGTATTTGGCACAATGGGACTATAATCCAACGTATGCTCTTAAAATTGAGAAATGTTGAGTGTGGTGAATTACTCTGTGAACTTGAATGGGTTAGTGTACTAGGTTCTATGGGCTTATTAGAGCTACAACAATTACATGCTTAA 525 0.379 MAQIYGVLKLRIQRGINLAIRDLRSSDPYVVVSMGTHQKLKTRIMHKDLNPEWNEELTLMVDDIKTPIHLKVFDKDMFSADDEMGEAVIDIRSYVKCWNKGLEKLPDGCVVKRIQPNENNYLAEESPCIWHNGTIIQRMLLKLRNVECGELLCELEWVSVLGSMGLLELQQLHA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01843 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 92 IPR035892 -
Adu08g01843 174 Gene3D C2 domain 3 163 IPR035892 -
Adu08g01843 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 162 IPR044562 -
Adu08g01843 174 SMART C2_3c 7 103 IPR000008 -
Adu08g01843 174 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Adu08g01843 174 Pfam C2 domain 7 93 IPR000008 -
Adu08g01843 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01843 Adu-Chr8 30371584 30372863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01843 39 166 C2H2 Transcription Factor Family AT1G70790 52.308 1.83e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01843 - - ahf:112769638 336.265