Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01838 atgttcgAGAGTGTGTGCGACTTACTAGATGAAAGAAAGTTGTGTAGAACTCATAGAGTTAGGTGCTTGAATCCAGAGCTCAGTGGTTCCAAAAAAATTGTTGATTTGAACTCACTGGACCGGAAGACAAATGTGGCTAGTGTTGGAAACTTATGCAGCCGTAATTATGCAATGGATAGACTCAACCATTTAAATGGAAGTAAAACATCAATCGCGGATATATCTGATGCAGTAAACAGCATGACTGGAGTTTCGGATGGTGGCAAGAGGTGTGATAGTGGCGATGAAGATAGTGTTAATAAGGGGAGCTCTGGTCGAAAGAGGAAGAGAGAGTCTATGTCAGAAATGCTGCACTGGATTCTTGATAGGGCTGAGAATCCTTGTGATCCTGCAATGGGTTCAATGCCCGAAAAGTCAAAGTGGAAGTCATATGGTAGTAAAGAGATCTGGAAGCAGGCTTTGTTGTTCCGGGAAGCTGTATTTCTGAAAAGTGATCACCCTCGTTGGCAGGGTCAAAGGATGCATCCTTGCATGTATGATGATCAGGTCGGGGCAAACTACAATCTTAGGGAGAGATTGAAAACGGACAAGAAATCAACATCTGGTGATGGCTCTTCACATGCTGGAGGAACAGAGGGAGGTTCCGGGAGAAGTCCAACTCCTCGTTCTAGTGCTGAGAAATGGTCACTTGATGAACCTGCCACCGTGCCCATTCCTATTGGCCCGGCCCATCAAGCTGAAGTTCCTGAATGGACTGGCATGGCTGTTGAGAGTGATTCAAAATGGTTTGGAAACCAAATATGGCCAGCAGCAAAGGTAAATACCAATCTTATCGAAAGGGATCCCATTGGAGTTGGAAGAAAAGATTCATGTGGCTGCCAATTTCAAGGTTCTGTTGAGTGTATCCAATTTCATGTTGCCCAGAAAAGGGCTAAACTTAAGCTAGAATTGGGTGATGCATTTTACATGTGGAATTTACACAAGACAGGGGAAGATGTTAGGCGATTGTGGACCGAACACGAAGAGAAGAAGTTTAAGGATGTGGTGAAAGCAAACCCTCTTTCACATGAGACATGTTTTTGGGAACAAATTTTCAAATCGTTTCCTACAAAGAGCAGGGAAGATTTAGTGAGTTACTACTTCAATGTCTTCCTCTTGCAGCGAAGGGGATACCAGGATCGGGATACTCCAAATGACATCAACAGCGATGATGATGAAGCAGAATATAGACCATTGAAGAATTCTTTCGGACATAACACAGATAACCCTCGCACTACCTTATTATCGCCTAAGAAGCCTAAGACAAAGGGAAGATAG 1317 0.4343 MFESVCDLLDERKLCRTHRVRCLNPELSGSKKIVDLNSLDRKTNVASVGNLCSRNYAMDRLNHLNGSKTSIADISDAVNSMTGVSDGGKRCDSGDEDSVNKGSSGRKRKRESMSEMLHWILDRAENPCDPAMGSMPEKSKWKSYGSKEIWKQALLFREAVFLKSDHPRWQGQRMHPCMYDDQVGANYNLRERLKTDKKSTSGDGSSHAGGTEGGSGRSPTPRSSAEKWSLDEPATVPIPIGPAHQAEVPEWTGMAVESDSKWFGNQIWPAAKVNTNLIERDPIGVGRKDSCGCQFQGSVECIQFHVAQKRAKLKLELGDAFYMWNLHKTGEDVRRLWTEHEEKKFKDVVKANPLSHETCFWEQIFKSFPTKSREDLVSYYFNVFLLQRRGYQDRDTPNDINSDDDEAEYRPLKNSFGHNTDNPRTTLLSPKKPKTKGR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01838 438 MobiDBLite consensus disorder prediction 202 225 - -
Adu08g01838 438 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 76 436 - -
Adu08g01838 438 CDD SANT 337 384 IPR001005 -
Adu08g01838 438 SMART sant 333 386 IPR001005 -
Adu08g01838 438 MobiDBLite consensus disorder prediction 195 228 - -
Adu08g01838 438 MobiDBLite consensus disorder prediction 415 429 - -
Adu08g01838 438 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 76 436 - -
Adu08g01838 438 MobiDBLite consensus disorder prediction 89 111 - -
Adu08g01838 438 Pfam Myb-like DNA-binding domain 336 383 IPR001005 -
Adu08g01838 438 MobiDBLite consensus disorder prediction 83 111 - -
Adu08g01838 438 MobiDBLite consensus disorder prediction 395 438 - -
Adu08g01838 438 MobiDBLite consensus disorder prediction 395 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01838 Adu-Chr8 30283022 30284338 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu08g01838 Myb_DNA-binding 4.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01838 - - adu:107485800 867.84